RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 FAM174AQ8TBP5 190 aa20.07■□□□□ 0.8
TRIM54-202ENST00000380075 SLC37A2Q8TED4 501 aa20.07■□□□□ 0.8
TRIM54-202ENST00000380075 ZNF582Q96NG8 517 aaPredicted RBP20.07■□□□□ 0.8
TRIM54-202ENST00000380075 CENPOQ9BU64 300 aa20.07■□□□□ 0.8
TRIM54-202ENST00000380075 ZNF350Q9GZX5 532 aa20.07■□□□□ 0.8
TRIM54-202ENST00000380075 SIAEQ9HAT2 523 aa20.07■□□□□ 0.8
TRIM54-202ENST00000380075 EVA1BQ9NVM1 165 aa20.07■□□□□ 0.8
TRIM54-202ENST00000380075 RHBDL2Q9NX52 303 aa20.07■□□□□ 0.8
TRIM54-202ENST00000380075 DAPK2Q9UIK4 370 aa20.07■□□□□ 0.8
TRIM54-202ENST00000380075 SAGE2PA6NJ88 616 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 MYL12BO14950 172 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 DSCR3O14972 297 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 CSO75390 466 aaKnown RBP20.06■□□□□ 0.8
TRIM54-202ENST00000380075 UBXN7O94888 489 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 SOX30O94993 753 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 GPR75O95800 540 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 ALOX5P09917 674 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 NBL1P41271 181 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 MLLT11Q13015 90 aaPredicted RBP20.06■□□□□ 0.8
TRIM54-202ENST00000380075 EIF2B5Q13144 721 aaKnown RBP20.06■□□□□ 0.8
TRIM54-202ENST00000380075 SSX1Q16384 188 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 OR4N5Q8IXE1 308 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 CYP4Z2PQ8N1L4 340 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 OR9Q1Q8NGQ5 310 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 OSTF1Q92882 214 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 SDF2Q99470 211 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 SEC14L4Q9UDX3 406 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 TESQ9UGI8 421 aaKnown RBP20.06■□□□□ 0.8
TRIM54-202ENST00000380075 FANCMQ8IYD8 2048 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 THADAQ6YHU6 1953 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 AGAP5A6NIR3 686 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 PRODHO43272 600 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 GALR3O60755 368 aaPredicted RBP20.06■□□□□ 0.8
TRIM54-202ENST00000380075 EIF2S1P05198 315 aaKnown RBP20.06■□□□□ 0.8
TRIM54-202ENST00000380075 S100A5P33763 92 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 TRHRP34981 398 aaPredicted RBP20.06■□□□□ 0.8
TRIM54-202ENST00000380075 LSSP48449 732 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 BLKP51451 505 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 C3orf38Q5JPI3 329 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 WDR53Q7Z5U6 358 aaPredicted RBP20.06■□□□□ 0.8
TRIM54-202ENST00000380075 TAF8Q7Z7C8 310 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 ZNF619Q8N2I2 560 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 CSNK1A1LQ8N752 337 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 C1orf216Q8TAB5 229 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 PATE1Q8WXA2 126 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 PIGKQ92643 395 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 SLC41A3Q96GZ6 507 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 CDADC1Q9BWV3 514 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 SAP130Q9H0E3 1048 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 ARMC7Q9H6L4 198 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 EVA1AQ9H8M9 152 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 HHATLQ9HCP6 504 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 NLGN3Q9NZ94 848 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 PEX16Q9Y5Y5 336 aa20.06■□□□□ 0.8
TRIM54-202ENST00000380075 LAMA1P25391 3075 aa20.05■□□□□ 0.8
TRIM54-202ENST00000380075 DNAH14Q0VDD8 3507 aa20.05■□□□□ 0.8
TRIM54-202ENST00000380075 OR5K3A6NET4 321 aa20.05■□□□□ 0.8
TRIM54-202ENST00000380075 CYR61O00622 381 aa20.05■□□□□ 0.8
TRIM54-202ENST00000380075 FRS3O43559 492 aa20.05■□□□□ 0.8
TRIM54-202ENST00000380075 STX11O75558 287 aa20.05■□□□□ 0.8
TRIM54-202ENST00000380075 DBIP07108 87 aaKnown RBP20.05■□□□□ 0.8
TRIM54-202ENST00000380075 RPS4Y1P22090 263 aaKnown RBP20.05■□□□□ 0.8
TRIM54-202ENST00000380075 RAB40BQ12829 278 aa20.05■□□□□ 0.8
TRIM54-202ENST00000380075 ZNF836Q6ZNA1 936 aa20.05■□□□□ 0.8
TRIM54-202ENST00000380075 MBOAT2Q6ZWT7 520 aa20.05■□□□□ 0.8
TRIM54-202ENST00000380075 RANBP3LQ86VV4 465 aaPredicted RBP20.05■□□□□ 0.8
TRIM54-202ENST00000380075 KLHL25Q9H0H3 589 aa20.05■□□□□ 0.8
TRIM54-202ENST00000380075 FGF20Q9NP95 211 aaPredicted RBP20.05■□□□□ 0.8
TRIM54-202ENST00000380075 PILRBQ9UKJ0 227 aa20.05■□□□□ 0.8
TRIM54-202ENST00000380075 GPR179Q6PRD1 2367 aa20.05■□□□□ 0.8
TRIM54-202ENST00000380075 CTSEP14091 401 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 PVRP15151 417 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 PSMA1P25786 263 aaKnown RBP20.04■□□□□ 0.8
TRIM54-202ENST00000380075 SOX18P35713 384 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 EEF1A1P68104 462 aaKnown RBP20.04■□□□□ 0.8
TRIM54-202ENST00000380075 LSM11P83369 360 aaKnown RBP eCLIP20.04■□□□□ 0.8
TRIM54-202ENST00000380075 ZNF45Q02386 682 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 PRKCDQ05655 676 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 ARMC6Q6NXE6 501 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 GDF7Q7Z4P5 450 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 CLDN22Q8N7P3 220 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 OR52I1Q8NGK6 324 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 CCDC3Q9BQI4 270 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 PLA2G12AQ9BZM1 189 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 TCEAL2Q9H3H9 227 aaPredicted RBP20.04■□□□□ 0.8
TRIM54-202ENST00000380075 EGLN3Q9H6Z9 239 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 POLE3Q9NRF9 147 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 MED17Q9NVC6 651 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 MRPS2Q9Y399 296 aaKnown RBP20.04■□□□□ 0.8
TRIM54-202ENST00000380075 ISPDA4D126 451 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 FGF17O60258 216 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 KIAA0513O60268 411 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 DNAJB6O75190 326 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 THEGLP0DJG4 465 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 FZD2Q14332 565 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 MINDY4Q4G0A6 757 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 TRMT12Q53H54 448 aaKnown RBP20.04■□□□□ 0.8
TRIM54-202ENST00000380075 DCST2Q5T1A1 773 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 CA13Q8N1Q1 262 aa20.04■□□□□ 0.8
TRIM54-202ENST00000380075 PHOX2BQ99453 314 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms