RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 MBTPS1Q14703 1052 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 DHCR24Q15392 516 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 HEPHL1Q6MZM0 1159 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 UQCC3Q6UW78 93 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 MOB3CQ70IA8 216 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 TSPAN33Q86UF1 283 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 C2CD4AQ8NCU7 369 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 LCORQ96JN0 433 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 CDCA3Q99618 268 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 ABCG8Q9H221 673 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 SEMA4BQ9NPR2 832 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 LHX9Q9NQ69 397 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 NPDC1Q9NQX5 325 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 RASL12Q9NYN1 266 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 MARCH2Q9P0N8 246 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 NFKBIL1Q9UBC1 381 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 SAMD4AQ9UPU9 718 aaKnown RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 GBF1Q92538 1859 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 TTC3P53804 2025 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 NUP214P35658 2090 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 F5H5T6 163 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 RFXAPO00287 272 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 CRCPO75575 148 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 IFNA10P01566 189 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 GALTP07902 379 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 RPS2P15880 293 aaKnown RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 PAX6P26367 422 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 CSNK1DP48730 415 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 RAB8AP61006 207 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 SGCGQ13326 291 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 FBXO48Q5FWF7 155 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 MTFR2Q6P444 385 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 ETV3LQ6ZN32 361 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 SSX6Q7RTT6 188 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 LRRC18Q8N456 261 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 PNPLA1Q8N8W4 532 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 OR5J2Q8NH18 312 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF461Q8TAF7 563 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 SH3RF2Q8TEC5 729 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 VOPP1Q96AW1 172 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 OCSTAMPQ9BR26 566 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 NAA11Q9BSU3 229 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 INPP5KQ9BT40 448 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 CRISPLD2Q9H0B8 497 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 KLHL31Q9H511 634 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 UNKLQ9H9P5 680 aaKnown RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 C19orf12Q9NSK7 152 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 TREX1Q9NSU2 369 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 RLIMQ9NVW2 624 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 MGAT4CQ9UBM8 478 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 RPS6KB2Q9UBS0 482 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 POLR3HQ9Y535 204 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 A0A1W2PQH9 124 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 OR2M5A3KFT3 312 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 MEIS3P2A8K0S8 358 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 PRAMEF11O60813 436 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 ABLIM3O94929 683 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 GIPP09681 153 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 PIPP12273 146 aaPredicted RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 PEPDP12955 493 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 HIST1H1BP16401 226 aaKnown RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 ANXA11P50995 505 aaKnown RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 CCR9P51686 369 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 RPS25P62851 125 aaKnown RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 BLOC1S1P78537 153 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 TNFRSF9Q07011 255 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 NCMAPQ5T1S8 102 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 MEDAGQ5VYS4 303 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 BAIAP2L2Q6UXY1 529 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF561Q8N587 486 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 RASGEF1AQ8N9B8 481 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 ZSCAN1Q8NBB4 408 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 FAM120BQ96EK7 910 aaKnown RBP7.02□□□□□ -1.29
CDKL5-201ENST00000379989 PIGQQ9BRB3 760 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 SUCNR1Q9BXA5 334 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 FSD1LQ9BXM9 530 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 PIGMQ9H3S5 423 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 MFSD1Q9H3U5 465 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 SLC2A6Q9UGQ3 507 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF225Q9UK10 706 aa7.02□□□□□ -1.29
CDKL5-201ENST00000379989 STK25O00506 426 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 CASKO14936 926 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 HCRTO43612 131 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 OR2T1O43869 369 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 UGDHO60701 494 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 RAMP2O60895 175 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 SNAPC5O75971 98 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 JCHAINP01591 159 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 SOD2P04179 222 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 MTHFD2P13995 350 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 ABOP16442 354 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 RCC1P18754 421 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 DRD5P21918 477 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 RGS19P49795 217 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 HTRA4P83105 476 aaPredicted RBP7.01□□□□□ -1.29
CDKL5-201ENST00000379989 FOXO1Q12778 655 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 LCP2Q13094 533 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 MS4A13Q5J8X5 152 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 TMEM31Q5JXX7 168 aa7.01□□□□□ -1.29
CDKL5-201ENST00000379989 HDDC3Q8N4P3 179 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms