RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 NEIL3Q8TAT5 605 aa18.69■□□□□ 0.58
TRIM13-203ENST00000378183 GTF2H4Q92759 462 aa18.69■□□□□ 0.58
TRIM13-203ENST00000378183 ZNF317Q96PQ6 595 aaPredicted RBP18.69■□□□□ 0.58
TRIM13-203ENST00000378183 PHF12Q96QT6 1004 aa18.69■□□□□ 0.58
TRIM13-203ENST00000378183 SDF2Q99470 211 aa18.69■□□□□ 0.58
TRIM13-203ENST00000378183 PCDHGB3Q9Y5G1 929 aa18.69■□□□□ 0.58
TRIM13-203ENST00000378183 DIDO1Q9BTC0 2240 aaKnown RBP18.68■□□□□ 0.58
TRIM13-203ENST00000378183 NPIPA5A0A0B4J1W7 369 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 DUXAA6NLW8 204 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 NPIPA7E9PJI5 369 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 CCL21O00585 134 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 ANGPTL1O95841 491 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 TPOP07202 933 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 NPIPA8P0DM63 369 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 OR12D1P0DN82 309 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 NCF2P19878 526 aaPredicted RBP18.68■□□□□ 0.58
TRIM13-203ENST00000378183 IRX1P78414 480 aaPredicted RBP18.68■□□□□ 0.58
TRIM13-203ENST00000378183 STX5Q13190 355 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 TOMM20Q15388 145 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 GTDC1Q4AE62 458 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 AGKQ53H12 422 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 WIPI1Q5MNZ9 446 aaPredicted RBP18.68■□□□□ 0.58
TRIM13-203ENST00000378183 HEPHL1Q6MZM0 1159 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 TNFAIP8L2Q6P589 184 aaPredicted RBP18.68■□□□□ 0.58
TRIM13-203ENST00000378183 DNAJC14Q6Y2X3 702 aaPredicted RBP18.68■□□□□ 0.58
TRIM13-203ENST00000378183 OLIG3Q7RTU3 272 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 YRDCQ86U90 279 aaKnown RBP18.68■□□□□ 0.58
TRIM13-203ENST00000378183 CD163Q86VB7 1156 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 RNF130Q86XS8 419 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 TRIML2Q8N7C3 387 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 OR2M3Q8NG83 312 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 ZFP90Q8TF47 636 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 DUSP19Q8WTR2 217 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 RAB8BQ92930 207 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 ITCHQ96J02 903 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 TBL1XR1Q9BZK7 514 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 EXO5Q9H790 373 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 RMND5AQ9H871 391 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 UBQLN4Q9NRR5 601 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 TMEM45AQ9NWC5 275 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 MED11Q9P086 117 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 PPP4R1LQ9P1A2 415 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 MED12Q93074 2177 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 COL12A1Q99715 3063 aa18.68■□□□□ 0.58
TRIM13-203ENST00000378183 PRAMEF27A3QJZ7 478 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 OR14I1A6ND48 311 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 ALG1L2C9J202 215 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 PRRG2O14669 202 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 ZCCHC18P0CG32 403 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 TROVE2P10155 538 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRIM13-203ENST00000378183 HOXB9P17482 250 aaPredicted RBP18.67■□□□□ 0.58
TRIM13-203ENST00000378183 CAPN3P20807 821 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 CLK3P49761 638 aaKnown RBP18.67■□□□□ 0.58
TRIM13-203ENST00000378183 MVDP53602 400 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 FUT5Q11128 374 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 ARHGAP11BQ3KRB8 267 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 GXYLT1Q4G148 440 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 COX20Q5RI15 118 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 C3P1Q6ZMU1 363 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 SSC4DQ8WTU2 575 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 SPDL1Q96EA4 605 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 OR2B2Q9GZK3 357 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 PAIP1Q9H074 479 aaKnown RBP18.67■□□□□ 0.58
TRIM13-203ENST00000378183 DSN1Q9H410 356 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 SDHAF3Q9NRP4 125 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 PNPLA3Q9NST1 481 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 SLC6A5Q9Y345 797 aa18.67■□□□□ 0.58
TRIM13-203ENST00000378183 IGLV3-32A0A0A0MS00 114 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 NPIPB9F8W1W9 429 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 HMGN4O00479 90 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 NR5A2O00482 541 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 FCMRO60667 390 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 KHKP50053 298 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 ARFIP2P53365 341 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 CASP6P55212 293 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 METTL21CQ5VZV1 264 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 NCCRP1Q6ZVX7 275 aaPredicted RBP18.66■□□□□ 0.58
TRIM13-203ENST00000378183 GATSQ8NAP1 163 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 OR5M9Q8NGP3 310 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 PNPT1Q8TCS8 783 aaKnown RBP18.66■□□□□ 0.58
TRIM13-203ENST00000378183 XAGE5Q8WWM1 108 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 TRIM33Q9UPN9 1127 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 MEMO1Q9Y316 297 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 DOPEY2Q9Y3R5 2298 aa18.66■□□□□ 0.58
TRIM13-203ENST00000378183 NCOA6Q14686 2063 aaPredicted RBP18.65■□□□□ 0.58
TRIM13-203ENST00000378183 LRRK2Q5S007 2527 aa18.65■□□□□ 0.58
TRIM13-203ENST00000378183 A0A1W2PQD3 144 aa18.65■□□□□ 0.58
TRIM13-203ENST00000378183 BCKDKO14874 412 aa18.65■□□□□ 0.58
TRIM13-203ENST00000378183 ZIC3O60481 467 aa18.65■□□□□ 0.58
TRIM13-203ENST00000378183 AK1P00568 194 aa18.65■□□□□ 0.58
TRIM13-203ENST00000378183 ATP6V1C1P21283 382 aa18.65■□□□□ 0.58
TRIM13-203ENST00000378183 SRD5A2P31213 254 aa18.65■□□□□ 0.58
TRIM13-203ENST00000378183 DCTP40126 519 aa18.65■□□□□ 0.58
TRIM13-203ENST00000378183 ATP12AP54707 1039 aa18.65■□□□□ 0.58
TRIM13-203ENST00000378183 CRYZQ08257 329 aaKnown RBP18.65■□□□□ 0.58
TRIM13-203ENST00000378183 C17orf67Q0P5P2 114 aa18.65■□□□□ 0.58
TRIM13-203ENST00000378183 CD226Q15762 336 aa18.65■□□□□ 0.58
TRIM13-203ENST00000378183 FLYWCH1Q4VC44 716 aa18.65■□□□□ 0.58
TRIM13-203ENST00000378183 KLHL26Q53HC5 615 aa18.65■□□□□ 0.58
TRIM13-203ENST00000378183 NHSL2Q5HYW2 709 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms