RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 GDF15Q99988 308 aa10.2□□□□□ -0.78
BEST1-201ENST00000378043 APOOQ9BUR5 198 aa10.2□□□□□ -0.78
BEST1-201ENST00000378043 ENKD1Q9H0I2 346 aa10.2□□□□□ -0.78
BEST1-201ENST00000378043 KIR3DX1Q9H7L2 352 aa10.2□□□□□ -0.78
BEST1-201ENST00000378043 WDR70Q9NW82 654 aa10.2□□□□□ -0.78
BEST1-201ENST00000378043 OBP2AQ9NY56 170 aa10.2□□□□□ -0.78
BEST1-201ENST00000378043 SLC7A7Q9UM01 511 aa10.2□□□□□ -0.78
BEST1-201ENST00000378043 SNX7Q9UNH6 387 aa10.2□□□□□ -0.78
BEST1-201ENST00000378043 ZNF443Q9Y2A4 671 aaPredicted RBP10.2□□□□□ -0.78
BEST1-201ENST00000378043 C2orf92A0A1B0GVN3 265 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 GABRPO00591 440 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 PRG2P13727 222 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 FUT1P19526 365 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 HTR1FP30939 366 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 ACSM1Q08AH1 577 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 DUSP5Q16690 384 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 CCDC92Q53HC0 331 aaPredicted RBP10.19□□□□□ -0.78
BEST1-201ENST00000378043 CCNJQ5T5M9 372 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 CDC73Q6P1J9 531 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 WDR88Q6ZMY6 472 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 TMEM91Q6ZNR0 172 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 AMIGO1Q86WK6 493 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 CPOQ8IVL8 374 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 PEX5LQ8IYB4 626 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 VWA5B2Q8N398 1253 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 NLGN4YQ8NFZ3 816 aaPredicted RBP10.19□□□□□ -0.78
BEST1-201ENST00000378043 OR14C36Q8NHC7 312 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 GANCQ8TET4 914 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 SLC7A6Q92536 515 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 SCARF2Q96GP6 870 aaPredicted RBP10.19□□□□□ -0.78
BEST1-201ENST00000378043 SECISBP2Q96T21 854 aaKnown RBP10.19□□□□□ -0.78
BEST1-201ENST00000378043 PRSS27Q9BQR3 290 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 PRRG3Q9BZD7 231 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 RNF32Q9H0A6 362 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 UBQLN3Q9H347 655 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 MTHFD2LQ9H903 347 aaPredicted RBP10.19□□□□□ -0.78
BEST1-201ENST00000378043 ISG20L2Q9H9L3 353 aaKnown RBP10.19□□□□□ -0.78
BEST1-201ENST00000378043 B3GAT2Q9NPZ5 323 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 LYARQ9NX58 379 aaKnown RBP10.19□□□□□ -0.78
BEST1-201ENST00000378043 KLHL28Q9NXS3 571 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 GDE1Q9NZC3 331 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 MALT1Q9UDY8 824 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 NUFIP1Q9UHK0 495 aaKnown RBP10.19□□□□□ -0.78
BEST1-201ENST00000378043 BOLA1Q9Y3E2 137 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 CCDC182A6NF36 153 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 GRXCR1A8MXD5 290 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 OR5F1O95221 314 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 HLA-DQB1P01920 261 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 GAAP10253 952 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 MAPK14Q16539 360 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 ZFP69Q49AA0 526 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 FBXO42Q6P3S6 717 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 NR2C2APQ86WQ0 139 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 GALNT12Q8IXK2 581 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 OR2L13Q8N349 312 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 LRRC25Q8N386 305 aaPredicted RBP10.19□□□□□ -0.78
BEST1-201ENST00000378043 FLVCR1-AS1Q8TAF5 88 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 NEIL3Q8TAT5 605 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 PHOSPHO2Q8TCD6 241 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 DOK4Q8TEW6 326 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 DNAJA4Q8WW22 397 aaPredicted RBP10.19□□□□□ -0.78
BEST1-201ENST00000378043 HERVK_113Q902F9 699 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 GAL3ST3Q96A11 431 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 ARMC5Q96C12 935 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 RNF170Q96K19 258 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 MS4A4EQ96PG1 132 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 DEPDC7Q96QD5 511 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 FYTTD1Q96QD9 318 aaKnown RBP10.19□□□□□ -0.78
BEST1-201ENST00000378043 DDX28Q9NUL7 540 aaKnown RBP10.19□□□□□ -0.78
BEST1-201ENST00000378043 MED17Q9NVC6 651 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 PRKAG2Q9UGJ0 569 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 WDR45Q9Y484 360 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 SIRT4Q9Y6E7 314 aaPredicted RBP10.19□□□□□ -0.78
BEST1-201ENST00000378043 CDH10Q9Y6N8 788 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 TRIOO75962 3097 aa10.19□□□□□ -0.78
BEST1-201ENST00000378043 POM121BA6NF01 834 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 CD8B2A6NJW9 211 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 DUXAA6NLW8 204 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 SLC31A1O15431 190 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 AKAP8O43823 692 aaKnown RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 KCNJ13O60928 360 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 HLA-DPB1P04440 258 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 TRAPPC2P0DI81 140 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 TRAPPC2BP0DI82 140 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 CD8BP10966 210 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 NDUFV2P19404 249 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 MYL9P24844 172 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 AK4P27144 223 aaPredicted RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 GCGRP47871 477 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 EVX1P49640 407 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 PPP3R1P63098 170 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 EEF1A1P68104 462 aaKnown RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 SIM1P81133 766 aaPredicted RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 RUNX2Q13950 521 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 FAM109BQ6ICB4 259 aaPredicted RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 ZNF322Q6U7Q0 402 aaPredicted RBP10.18□□□□□ -0.78
BEST1-201ENST00000378043 GLCCI1Q86VQ1 547 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 MARCH9Q86YJ5 346 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 KLBQ86Z14 1044 aa10.18□□□□□ -0.78
BEST1-201ENST00000378043 KLHL36Q8N4N3 616 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms