RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ROPN1LQ96C74 230 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 TRNT1Q96Q11 434 aaKnown RBP12.09□□□□□ -0.47
CKAP2-202ENST00000378034 ZNF350Q9GZX5 532 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 UBQLN3Q9H347 655 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 ACKR4Q9NPB9 350 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 SLC25A37Q9NYZ2 338 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 FLRT3Q9NZU0 649 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 SLAMF8Q9P0V8 285 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 PPP4R1LQ9P1A2 415 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 ADAM21Q9UKJ8 722 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 NPIPB9F8W1W9 429 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 GNB5O14775 395 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 SCO2O43819 266 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 SHOX2O60902 331 aaPredicted RBP12.09□□□□□ -0.47
CKAP2-202ENST00000378034 UNC5CO95185 931 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 RFPL3SP0C7P2 107 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 GDF1P27539 372 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 CRATP43155 626 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 MAGEA5P43359 124 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 GNA13Q14344 377 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 RGNQ15493 299 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.09□□□□□ -0.47
CKAP2-202ENST00000378034 COX20Q5RI15 118 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.09□□□□□ -0.47
CKAP2-202ENST00000378034 ZAR1Q86SH2 424 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 DHDDSQ86SQ9 333 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 GALNT10Q86SR1 603 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 MTDHQ86UE4 582 aaKnown RBP12.09□□□□□ -0.47
CKAP2-202ENST00000378034 RETREG3Q86VR2 466 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 MSRB3Q8IXL7 192 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 WDSUB1Q8N9V3 476 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 RP9Q8TA86 221 aaKnown RBP12.09□□□□□ -0.47
CKAP2-202ENST00000378034 PNPT1Q8TCS8 783 aaKnown RBP12.09□□□□□ -0.47
CKAP2-202ENST00000378034 AURKBQ96GD4 344 aaPredicted RBP12.09□□□□□ -0.47
CKAP2-202ENST00000378034 GNRHR2Q96P88 292 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 SAP130Q9H0E3 1048 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 TSPAN10Q9H1Z9 355 aaPredicted RBP12.09□□□□□ -0.47
CKAP2-202ENST00000378034 CALML5Q9NZT1 146 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 VAPAQ9P0L0 249 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 ARL2BPQ9Y2Y0 163 aa12.09□□□□□ -0.47
CKAP2-202ENST00000378034 MRPS18CQ9Y3D5 142 aaKnown RBP12.09□□□□□ -0.47
CKAP2-202ENST00000378034 IGLV3-32A0A0A0MS00 114 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 EVPLLA8MZ36 301 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 ADAM10O14672 748 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 NDUFB5O43674 189 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 SUSD5O60279 629 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 HCN1O60741 890 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 ANGPTL1O95841 491 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 C1QCP02747 245 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 HPNP05981 417 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 BMP2P12643 396 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 DCTP40126 519 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 DSTNP60981 165 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 HPCAP84074 193 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 NFYCQ13952 458 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 CYLC2Q14093 348 aaPredicted RBP12.08□□□□□ -0.48
CKAP2-202ENST00000378034 MMEL1Q495T6 779 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 KLHL26Q53HC5 615 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 RUNDC3AQ59EK9 446 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 LRRC74BQ6ZQY2 392 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 MARCH3Q86UD3 253 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 CCT8L2Q96SF2 557 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 CCDC106Q9BWC9 280 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 DEFB127Q9H1M4 99 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 MYLK2Q9H1R3 596 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 P2RX2Q9UBL9 471 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.08□□□□□ -0.48
CKAP2-202ENST00000378034 WDR45Q9Y484 360 aa12.08□□□□□ -0.48
CKAP2-202ENST00000378034 A0A1B0GVC2 190 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 C2orf72A6NCS6 295 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 TMEM247A6NEH6 219 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 H3BNH8 94 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 FBP2O00757 339 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 WISP1O95388 367 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 FAM107AO95990 144 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 ETFAP13804 333 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 GPX2P18283 190 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 MSX1P28360 303 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 FUT5Q11128 374 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 ZNF141Q15928 474 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 GPAT3Q53EU6 434 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 ARHGAP11AQ6P4F7 1023 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 APOOLQ6UXV4 268 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 SNX32Q86XE0 403 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 ANKS4BQ8N8V4 417 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 FADS6Q8N9I5 356 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 PCYOX1LQ8NBM8 494 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 DUSP19Q8WTR2 217 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 ANKRD27Q96NW4 1050 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 CGREF1Q99674 301 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 ARMCX1Q9P291 453 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 DTNAQ9Y4J8 743 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 SPENQ96T58 3664 aaKnown RBP12.07□□□□□ -0.48
CKAP2-202ENST00000378034 PRAMEF27A3QJZ7 478 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 KIAA0513O60268 411 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 FCMRO60667 390 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 NR2F1P10589 423 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 GNLYP22749 145 aa12.07□□□□□ -0.48
CKAP2-202ENST00000378034 SRD5A2P31213 254 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms