RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 CACUL1Q86Y37 369 aa16.82■□□□□ 0.28
GNE-201ENST00000377902 OR5K2Q8NHB8 316 aa16.82■□□□□ 0.28
GNE-201ENST00000377902 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.82■□□□□ 0.28
GNE-201ENST00000377902 OSGEPL1Q9H4B0 414 aa16.82■□□□□ 0.28
GNE-201ENST00000377902 IL20Q9NYY1 176 aa16.82■□□□□ 0.28
GNE-201ENST00000377902 H2AFY2Q9P0M6 372 aaPredicted RBP16.82■□□□□ 0.28
GNE-201ENST00000377902 SLC13A4Q9UKG4 626 aa16.82■□□□□ 0.28
GNE-201ENST00000377902 SCN3AQ9NY46 2000 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 A0A0G2JPF8 293 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 CIB4A0PJX0 185 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 HNRNPCL2B2RXH8 293 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 HNRNPCL3B7ZW38 293 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 CHST10O43529 356 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 HYAL3O43820 417 aaPredicted RBP16.81■□□□□ 0.28
GNE-201ENST00000377902 RGS9O75916 674 aaPredicted RBP16.81■□□□□ 0.28
GNE-201ENST00000377902 CD3GP09693 182 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 HNRNPCL4P0DMR1 293 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 SSTR2P30874 369 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 ST3GAL3Q11203 375 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 MLC1Q15049 377 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 ZNF697Q5TEC3 545 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 RPTNQ6XPR3 784 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 KIAA0907Q7Z7F0 614 aaPredicted RBP16.81■□□□□ 0.28
GNE-201ENST00000377902 SYT9Q86SS6 491 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 OR9A2Q8NGT5 310 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 PELI2Q9HAT8 420 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 BEX1Q9HBH7 125 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 ADAM30Q9UKF2 790 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 NOTCH4Q99466 2003 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 A0A1W2PPK0 400 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 BTN3A3O00478 584 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 CASC3O15234 703 aaKnown RBP16.81■□□□□ 0.28
GNE-201ENST00000377902 MRPL3P09001 348 aaKnown RBP16.81■□□□□ 0.28
GNE-201ENST00000377902 HK1P19367 917 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 AHCYP23526 432 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 PTBP1P26599 531 aaKnown RBP eCLIP16.81■□□□□ 0.28
GNE-201ENST00000377902 NTSP30990 170 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 IFNGR2P38484 337 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 EPHA5P54756 1037 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 E2F1Q01094 437 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 SLC3A1Q07837 685 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 TGM3Q08188 693 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 AGERQ15109 404 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 FCRLBQ6BAA4 426 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 LILRA6Q6PI73 481 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 TEX261Q6UWH6 196 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 ZNF620Q6ZNG0 422 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 GDF7Q7Z4P5 450 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 OR52N1Q8NH53 320 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 DOK4Q8TEW6 326 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 ING5Q8WYH8 240 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 TTC9Q92623 222 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 OSTF1Q92882 214 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 ALG8Q9BVK2 526 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 SYNPO2LQ9H987 977 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 ASB6Q9NWX5 421 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 CACNG2Q9Y698 323 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 U3KQ87 197 aa16.81■□□□□ 0.28
GNE-201ENST00000377902 DOCK9Q9BZ29 2069 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 VCANP13611 3396 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 GCGRP47871 477 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 CLCNKAP51800 687 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 PDX1P52945 283 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 POU4F3Q15319 338 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 LYPD4Q6UWN0 246 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 ESPNLQ6ZVH7 1005 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 PLEKHM3Q6ZWE6 761 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 CXXC5Q7LFL8 322 aaKnown RBP16.8■□□□□ 0.28
GNE-201ENST00000377902 LRRC17Q8N6Y2 441 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 ARHGDIGQ99819 225 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 TTTY10Q9BZA0 68 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 GHITMQ9H3K2 345 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 GPR34Q9UPC5 381 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 MRPS7Q9Y2R9 242 aaKnown RBP16.8■□□□□ 0.28
GNE-201ENST00000377902 CENPVL1A0A0U1RR11 272 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 SYNDIG1LA6NDD5 238 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 ERI3O43414 337 aaKnown RBP16.8■□□□□ 0.28
GNE-201ENST00000377902 SLC22A5O76082 557 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 ZGLP1P0C6A0 271 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 PITPNBP48739 271 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 CCR6P51684 374 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 SRP54P61011 504 aaKnown RBP16.8■□□□□ 0.28
GNE-201ENST00000377902 ACSM1Q08AH1 577 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 KLHL12Q53G59 568 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 HBMQ6B0K9 141 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 DGLUCYQ7Z3D6 616 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 LRRC28Q86X40 367 aaPredicted RBP16.8■□□□□ 0.28
GNE-201ENST00000377902 ZNF680Q8NEM1 530 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 OR13C5Q8NGS8 318 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 GPR137Q96N19 417 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 LRRC3BQ96PB8 259 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 MCHR1Q99705 422 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 KLHL1Q9NR64 748 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 BABAM2Q9NXR7 383 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 SLC7A7Q9UM01 511 aa16.8■□□□□ 0.28
GNE-201ENST00000377902 PRRT4C9JH25 899 aa16.79■□□□□ 0.28
GNE-201ENST00000377902 J3QRE1 110 aa16.79■□□□□ 0.28
GNE-201ENST00000377902 CXCL14O95715 111 aa16.79■□□□□ 0.28
GNE-201ENST00000377902 ERGP11308 486 aa16.79■□□□□ 0.28
GNE-201ENST00000377902 ZNF250P15622 560 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms