RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 PXT1Q8NFP0 134 aa8.55□□□□□ -1.04
CRNKL1-201ENST00000377327 SMAP2Q8WU79 429 aaPredicted RBP8.55□□□□□ -1.04
CRNKL1-201ENST00000377327 THEM6Q8WUY1 208 aa8.55□□□□□ -1.04
CRNKL1-201ENST00000377327 PRAP1Q96NZ9 151 aa8.55□□□□□ -1.04
CRNKL1-201ENST00000377327 C12orf57Q99622 126 aa8.55□□□□□ -1.04
CRNKL1-201ENST00000377327 MRI1Q9BV20 369 aa8.55□□□□□ -1.04
CRNKL1-201ENST00000377327 ATG5Q9H1Y0 275 aa8.55□□□□□ -1.04
CRNKL1-201ENST00000377327 MRPS30Q9NP92 439 aaKnown RBP8.55□□□□□ -1.04
CRNKL1-201ENST00000377327 ADAMTS7Q9UKP4 1686 aa8.55□□□□□ -1.04
CRNKL1-201ENST00000377327 DDX60Q8IY21 1712 aaKnown RBP8.55□□□□□ -1.04
CRNKL1-201ENST00000377327 MICAL3Q7RTP6 2002 aa8.55□□□□□ -1.04
CRNKL1-201ENST00000377327 TUBAL3A6NHL2 446 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 EEF1E1-BLOC1S5C9J1V9 151 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 CDC40O60508 579 aaKnown RBP eCLIP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 SIX6O95475 246 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 SNAI1O95863 264 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 B3GALT4O96024 378 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 PRSS3P35030 304 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ETV5P41161 510 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 SRP9P49458 86 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 COX20Q5RI15 118 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 CALHM3Q86XJ0 350 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ZNF584Q8IVC4 421 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 THAP4Q8WY91 577 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 EGLN3Q9H6Z9 239 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 TRAV18A0A075B6X5 111 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 NDUFS4O43181 175 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 COCHO43405 550 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 PPM1BO75688 479 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ADRB1P08588 477 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ELAVL4P26378 380 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 DLSTP36957 453 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 XCR1P46094 333 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 GAS6Q14393 721 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 SYT14P1Q58G82 188 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ARSIQ5FYB1 569 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 MLIPQ5VWP3 458 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 C22orf39Q6P5X5 142 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 FAM26EQ8N5C1 309 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 NUP43Q8NFH3 380 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 OR2L3Q8NG85 312 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 OR10H5Q8NGA6 315 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 SNIP1Q8TAD8 396 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 PPP1R14AQ96A00 147 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ZNF578Q96N58 590 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 TREX2Q9BQ50 279 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 C1QTNF7Q9BXJ2 289 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 SYNPO2LQ9H987 977 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 MYNNQ9NPC7 610 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 C5AR2Q9P296 337 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 FBXL2Q9UKC9 423 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 CAMK2AQ9UQM7 478 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 A0A0D9SG52 128 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 TBC1D3BA6NDS4 549 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 EMC8O43402 210 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 IFNA21P01568 189 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 PET100P0DJ07 73 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 UGT2B7P16662 529 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 CERS1P27544 350 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 AQP2P41181 271 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ARHGDIBP52566 201 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ERVK-21P61565 698 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 SORDQ00796 357 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ARFRP1Q13795 201 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 P2RY14Q15391 338 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 C18orf63Q68DL7 685 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 KLHL24Q6TFL4 600 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 SLC38A5Q8WUX1 472 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 SLC41A3Q96GZ6 507 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ZNF558Q96NG5 402 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 CNN2Q99439 309 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 TMEM38AQ9H6F2 299 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 SIRT5Q9NXA8 310 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 KIF25Q9UIL4 384 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 COL14A1Q05707 1796 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ARAP2Q8WZ64 1704 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 GXYLT2A0PJZ3 443 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 D6RAR5 112 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 CACNB4O00305 520 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 CASC3O15234 703 aaKnown RBP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 PIP5K1CO60331 668 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ZNF623O75123 536 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 STATHP02808 62 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 AMY2AP04746 511 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ADH6P28332 368 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 TSPAN31Q12999 210 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 MAPK14Q16539 360 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 PGGHGQ32M88 737 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 TP53I3Q53FA7 332 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 C1orf189Q5VU69 101 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 GLT8D1Q68CQ7 371 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 FAM129CQ86XR2 697 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 DCUN1D3Q8IWE4 304 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 CYB561A3Q8NBI2 242 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 OR7G2Q8NG99 324 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ZCCHC10Q8TBK6 192 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 ACOT11Q8WXI4 607 aaPredicted RBP8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 UCN3Q969E3 161 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 C4orf36Q96KX1 117 aa8.54□□□□□ -1.04
CRNKL1-201ENST00000377327 MED18Q9BUE0 208 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms