RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 NUP62P37198 522 aaPredicted RBP12.1□□□□□ -0.47
MSH5-204ENST00000375755 DSTNP60981 165 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 RPS13P62277 151 aaKnown RBP12.1□□□□□ -0.47
MSH5-204ENST00000375755 ZNF33BQ06732 778 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 ELAVL3Q14576 367 aaKnown RBP12.1□□□□□ -0.47
MSH5-204ENST00000375755 SHEQ5VZ18 495 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 REEP3Q6NUK4 255 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 ZNF547Q8IVP9 402 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 CFAP206Q8IYR0 622 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 OR2T4Q8NH00 348 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 MED8Q96G25 268 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 FUZQ9BT04 418 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 TM7SF3Q9NS93 570 aa12.1□□□□□ -0.47
MSH5-204ENST00000375755 MRPS18AQ9NVS2 196 aaKnown RBP12.1□□□□□ -0.47
MSH5-204ENST00000375755 H0YIV9 168 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 M0R233 179 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 UGDHO60701 494 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 NME6O75414 186 aaPredicted RBP12.09□□□□□ -0.47
MSH5-204ENST00000375755 B3GALNT1O75752 331 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 SLCO2B1O94956 709 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 HLA-DPB1P04440 258 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 MMP11P24347 488 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 SYTL3Q4VX76 610 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 PLEKHS1Q5SXH7 462 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 VASNQ6EMK4 673 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 FAM180BQ6P0A1 224 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 MEX3DQ86XN8 651 aaKnown RBP12.09□□□□□ -0.47
MSH5-204ENST00000375755 TRAPPC5Q8IUR0 188 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 LINC00518Q8N0U6 118 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 OR5M3Q8NGP4 307 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 ASZ1Q8WWH4 475 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 SUSD6Q92537 303 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 NUS1Q96E22 293 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 LRIG1Q96JA1 1093 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 LGR4Q9BXB1 951 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 OSGEPL1Q9H4B0 414 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 GDE1Q9NZC3 331 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 EXOSC1Q9Y3B2 195 aaKnown RBP12.09□□□□□ -0.47
MSH5-204ENST00000375755 NUBP2Q9Y5Y2 271 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 A0A1B0GVI7 797 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 MFSD2BA6NFX1 497 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 MID1O15344 667 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 HRO43593 1189 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 BCHEP06276 602 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 GIFP27352 417 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 GPR1P46091 355 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 MTNR1AP48039 350 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 ZP1P60852 638 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 COX10Q12887 443 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 ZNF155Q12901 538 aaPredicted RBP12.09□□□□□ -0.47
MSH5-204ENST00000375755 SLC36A2Q495M3 483 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 GRHL2Q6ISB3 625 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 PODNL1Q6PEZ8 512 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 LYPD4Q6UWN0 246 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 ZER1Q7Z7L7 766 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 FTMTQ8N4E7 242 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 C2orf73Q8N5S3 287 aaPredicted RBP12.09□□□□□ -0.47
MSH5-204ENST00000375755 PPCDCQ96CD2 204 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 SIPA1Q96FS4 1042 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 OR4K3Q96R72 315 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 ABHD1Q96SE0 405 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 PLA2G12AQ9BZM1 189 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 BRF2Q9HAW0 419 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 CLEC1BQ9P126 229 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 ZMAT5Q9UDW3 170 aaKnown RBP12.09□□□□□ -0.47
MSH5-204ENST00000375755 PRODHO43272 600 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 LILRB5O75023 590 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 FURINP09958 794 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 HSD3B2P26439 372 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 DRD3P35462 400 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 SLC1A3P43003 542 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 TPMTP51580 245 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 PIN1Q13526 163 aaPredicted RBP12.09□□□□□ -0.47
MSH5-204ENST00000375755 TSTA3Q13630 321 aaPredicted RBP12.09□□□□□ -0.47
MSH5-204ENST00000375755 C2orf27AQ580R0 203 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 IER5LQ5T953 404 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 TFAP2EQ6VUC0 442 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 ZNF687Q8N1G0 1237 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 TMIEQ8NEW7 156 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 OR2T35Q8NGX2 323 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 SGTBQ96EQ0 304 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 TEFMQ96QE5 360 aaKnown RBP12.09□□□□□ -0.47
MSH5-204ENST00000375755 BEX1Q9HBH7 125 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 HCN3Q9P1Z3 774 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 KLHL42Q9P2K6 505 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 SCP2D1Q9UJQ7 156 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 SH2B3Q9UQQ2 575 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 TICRRQ7Z2Z1 1910 aa12.09□□□□□ -0.47
MSH5-204ENST00000375755 SLC5A10A0PJK1 596 aa12.08□□□□□ -0.48
MSH5-204ENST00000375755 SLC22A23A1A5C7 686 aa12.08□□□□□ -0.48
MSH5-204ENST00000375755 SAP18O00422 153 aaKnown RBP12.08□□□□□ -0.48
MSH5-204ENST00000375755 NPC1O15118 1278 aa12.08□□□□□ -0.48
MSH5-204ENST00000375755 SLC16A8O95907 504 aa12.08□□□□□ -0.48
MSH5-204ENST00000375755 FCER2P06734 321 aa12.08□□□□□ -0.48
MSH5-204ENST00000375755 PRLHRP49683 370 aa12.08□□□□□ -0.48
MSH5-204ENST00000375755 CCR6P51684 374 aa12.08□□□□□ -0.48
MSH5-204ENST00000375755 CDK5Q00535 292 aa12.08□□□□□ -0.48
MSH5-204ENST00000375755 TAP2Q03519 686 aa12.08□□□□□ -0.48
MSH5-204ENST00000375755 ZNF763Q0D2J5 394 aa12.08□□□□□ -0.48
MSH5-204ENST00000375755 NAE1Q13564 534 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms