RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 PRRC1Q96M27 445 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 MS4A4EQ96PG1 132 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 CNOT2Q9NZN8 540 aaKnown RBP7.69□□□□□ -1.18
UBR4-202ENST00000375224 AASSQ9UDR5 926 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 FTSJ1Q9UET6 329 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 DAPP1Q9UN19 280 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 NINQ8N4C6 2090 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 DSPPQ9NZW4 1301 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 SPTY2D1-AS1A0A0U1RR47 76 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 WASHC1A8K0Z3 465 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 GMDSO60547 372 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 ZNF217O75362 1048 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 BCAS1O75363 584 aaPredicted RBP7.69□□□□□ -1.18
UBR4-202ENST00000375224 CHRM4P08173 479 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 IFI6P09912 130 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 THEGLP0DJG4 465 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 GABRB1P18505 474 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 CHMP24386 653 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 CD6P30203 668 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 MAP2K4P45985 399 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 ALDH6A1Q02252 535 aaKnown RBP7.69□□□□□ -1.18
UBR4-202ENST00000375224 SMAD4Q13485 552 aaKnown RBP7.69□□□□□ -1.18
UBR4-202ENST00000375224 Q6ZPB1 254 aaPredicted RBP7.69□□□□□ -1.18
UBR4-202ENST00000375224 PTCHD4Q6ZW05 846 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 SYT13Q7L8C5 426 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 STX19Q8N4C7 294 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 UBE2FQ969M7 185 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 FBXW5Q969U6 566 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 YIPF6Q96EC8 236 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 YIPF4Q9BSR8 244 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 IFT46Q9NQC8 304 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 SLC2A4RGQ9NR83 387 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 PLSCR3Q9NRY6 295 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 HRASLS2Q9NWW9 162 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 ZNF226Q9NYT6 803 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 KCMF1Q9P0J7 381 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 NDRG2Q9UN36 371 aaKnown RBP7.69□□□□□ -1.18
UBR4-202ENST00000375224 CYP8B1Q9UNU6 501 aa7.69□□□□□ -1.18
UBR4-202ENST00000375224 CCDC182A6NF36 153 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 HMX3A6NHT5 357 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 SAGE2PA6NJ88 616 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 CHURC1-FNTBB4DL54 471 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 H3BQ06 376 aaPredicted RBP7.68□□□□□ -1.18
UBR4-202ENST00000375224 CTSVO60911 334 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 SRFP11831 508 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 GSTM3P21266 225 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 FAM214AQ32MH5 1076 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 ZNF750Q32MQ0 723 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 DEFB134Q4QY38 66 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 ZNF311Q5JNZ3 666 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 TMEM31Q5JXX7 168 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 CDC73Q6P1J9 531 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 CD300LDQ6UXZ3 194 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 RNF44Q7L0R7 432 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 ZCCHC10Q8TBK6 192 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 GGHQ92820 318 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 KLHDC7BQ96G42 594 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 ITPAQ9BY32 194 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 POLR2J3Q9H1A7 115 aaKnown RBP7.68□□□□□ -1.18
UBR4-202ENST00000375224 WSB2Q9NYS7 404 aaPredicted RBP7.68□□□□□ -1.18
UBR4-202ENST00000375224 A4GNTQ9UNA3 340 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 SLC22A7Q9Y694 548 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 CLDN24A6NM45 220 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 A8MV72 311 aaPredicted RBP7.68□□□□□ -1.18
UBR4-202ENST00000375224 H0YGG7 62 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 NME6O75414 186 aaPredicted RBP7.68□□□□□ -1.18
UBR4-202ENST00000375224 ALPPL2P10696 532 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 MASP1P48740 699 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 MAN2A2P49641 1150 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 ARF3P61204 181 aaPredicted RBP7.68□□□□□ -1.18
UBR4-202ENST00000375224 SNRPGP62308 76 aaKnown RBP7.68□□□□□ -1.18
UBR4-202ENST00000375224 DUSP2Q05923 314 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 DESI1Q6ICB0 168 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 CASP12Q6UXS9 341 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 SLC16A12Q6ZSM3 486 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 SLC22A18ASQ8N1D0 253 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 SLC38A4Q969I6 547 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 C16orf58Q96GQ5 468 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 FCRL4Q96PJ5 515 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 PHF7Q9BWX1 381 aaPredicted RBP7.68□□□□□ -1.18
UBR4-202ENST00000375224 ANKRD19PQ9H560 264 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 SYNPO2LQ9H987 977 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 PCDHB16Q9NRJ7 776 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 GPR27Q9NS67 375 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 NDOR1Q9UHB4 597 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 A0A1W2PPC4 97 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 TLR4O00206 839 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 TBX1O43435 398 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 SOX30O94993 753 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 CPMP14384 443 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 IGFBP4P22692 258 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 POU1F1P28069 291 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 TSPAN7P41732 249 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 RUNX2Q13950 521 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 CTF1Q16619 201 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 PGBD2Q6P3X8 592 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 ZCCHC12Q6PEW1 402 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 KIF18BQ86Y91 864 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 CCDC36Q8IYA8 594 aa7.68□□□□□ -1.18
UBR4-202ENST00000375224 OR4D11Q8NGI4 311 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms