RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 LINGO4Q6UY18 593 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 IQCHQ86VS3 1027 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 LILRB2Q8N423 598 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 C10orf90Q96M02 699 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 SMG9Q9H0W8 520 aaKnown RBP19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 REEP4Q9H6H4 257 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 AUNIPQ9H7T9 357 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 NMRK2Q9NPI5 230 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 ZNF69Q9UC07 566 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 DENND4AQ7Z401 1863 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 CHD5Q8TDI0 1954 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 SSX5O60225 188 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 UBL3O95164 117 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 RLN2P04090 185 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 MAPK9P45984 424 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 CAPZA2P47755 286 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 RAP2BP61225 183 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 LIPJQ5W064 366 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 SLC30A6Q6NXT4 461 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 SPICQ8N5J4 248 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 POGLUT1Q8NBL1 392 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 OR4K5Q8NGD3 323 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 GNPDA2Q8TDQ7 276 aa19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 C7orf50Q9BRJ6 194 aaKnown RBP19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 TINAGL1Q9GZM7 467 aaPredicted RBP19.28■□□□□ 0.68
TMEFF1-201ENST00000374879 A0A0B4J203 849 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 ARPC1BO15143 372 aaKnown RBP19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 NDUFS6O75380 124 aaKnown RBP19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 CHRNA6Q15825 494 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 SWI5Q1ZZU3 235 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 PRSS53Q2L4Q9 553 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 FAM180BQ6P0A1 224 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 ZFP37Q9Y6Q3 630 aaPredicted RBP19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 VWA8A3KMH1 1905 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 A0A0G2JK05 382 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 LRRN3E7EW58 273 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 EIF3GO75821 320 aaKnown RBP eCLIP19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 UBXN2BQ14CS0 331 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 FAM26DQ5JW98 314 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 KIAA1211LQ6NV74 962 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 ZNF322Q6U7Q0 402 aaPredicted RBP19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 VRK3Q8IV63 474 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 SLC38A5Q8WUX1 472 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 HMGB4Q8WW32 186 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 LINC01599Q8WXQ3 324 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 GPR62Q9BZJ7 368 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 LRRN3Q9H3W5 708 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 ELAC1Q9H777 363 aaKnown RBP19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 SGK2Q9HBY8 427 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 A4GNTQ9UNA3 340 aa19.27■□□□□ 0.68
TMEFF1-201ENST00000374879 TMEM88BA6NKF7 163 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 KDM4EB2RXH2 506 aaPredicted RBP19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 C5orf58C9J3I9 102 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 SULT1B1O43704 296 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 PRAF2O60831 178 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 GPR37L1O60883 481 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 SPDEFO95238 335 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 HIST1H2ABP04908 130 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 TIA1P31483 386 aaKnown RBP eCLIP19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 KCNJ3P48549 501 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 RPS24P62847 133 aaKnown RBP19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 SHC2P98077 582 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 DYRK1AQ13627 763 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 CD300LDQ6UXZ3 194 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 HIST3H2AQ7L7L0 130 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 IZUMO1Q8IYV9 350 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 MEIOBQ8N635 442 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 FAM71CQ8NEG0 241 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 PXT1Q8NFP0 134 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 OR4D9Q8NGE8 314 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 C2CD4CQ8TF44 421 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 HIST1H2ACQ93077 130 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 NARS2Q96I59 477 aaKnown RBP19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 CMSS1Q9BQ75 279 aaKnown RBP19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 GSN-AS1Q9NRJ2 163 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 A0A1B0GUH1 482 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 SGCEO43556 437 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 RASGRP1O95267 797 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 CH25HO95992 272 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 PSMB1P20618 241 aaKnown RBP19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 GDNFP39905 211 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 LGALS3BPQ08380 585 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 CLEC12AQ5QGZ9 265 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 TNFAIP8L2Q6P589 184 aaPredicted RBP19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 HAVCR2Q8TDQ0 301 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 ABCG4Q9H172 646 aa19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 HMX1Q9NP08 348 aaPredicted RBP19.26■□□□□ 0.67
TMEFF1-201ENST00000374879 OR2A4O95047 310 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 ACAA1P09110 424 aaPredicted RBP19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 CBSLP0DN79 551 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 RPL17P18621 184 aaKnown RBP19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 GALP22466 123 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 CBSP35520 551 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 FLT3LGP49771 235 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 CTSCP53634 463 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 IKBIPQ70UQ0 350 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 SFT2D1Q8WV19 159 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 ASB11Q8WXH4 323 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 OR2A7Q96R45 310 aa19.25■□□□□ 0.67
TMEFF1-201ENST00000374879 TAS2R3Q9NYW6 316 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms