RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 CXCL3P19876 107 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 ENPP1P22413 925 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 IFNGR2P38484 337 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 PCBP4P57723 403 aaKnown RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 POU6F2P78424 691 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 DBPQ10586 325 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 EOGTQ5NDL2 527 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 PXDC1Q5TGL8 231 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 TMEM107Q6UX40 140 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 LRRC56Q8IYG6 542 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 GPR135Q8IZ08 494 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 POGLUT1Q8NBL1 392 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 FBXO15Q8NCQ5 510 aaPredicted RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 MRGPRX3Q96LB0 322 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 ISG20L2Q9H9L3 353 aaKnown RBP10.38□□□□□ -0.75
CCDC40-203ENST00000374877 EVA1BQ9NVM1 165 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 PRKAB1Q9Y478 270 aa10.38□□□□□ -0.75
CCDC40-203ENST00000374877 TBX6O95947 436 aaPredicted RBP10.37□□□□□ -0.75
CCDC40-203ENST00000374877 RAF1P04049 648 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 BSGP35613 385 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 GPR4P46093 362 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF81P51508 661 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 FAM27D1Q5T7N8 215 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 PIP5KL1Q5T9C9 394 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 VASNQ6EMK4 673 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 C17orf64Q86WR6 236 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 ANKRD53Q8N9V6 530 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 OR5M3Q8NGP4 307 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 OR4Q3Q8NH05 313 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 ACOT12Q8WYK0 555 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 PPP1R16AQ96I34 528 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 SPATA5L1Q9BVQ7 753 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 OSGEPL1Q9H4B0 414 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 KLHL1Q9NR64 748 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 CUEDC1Q9NWM3 386 aaPredicted RBP10.37□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF224Q9NZL3 707 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 TNFRSF10DQ9UBN6 386 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 CD207Q9UJ71 328 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 NUP50Q9UKX7 468 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 RASD1Q9Y272 281 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 TEX13CA0A0J9YWL9 993 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 LINC00862A6NCI5 91 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 K7ESM1 405 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 SOCS6O14544 535 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 PRKRAO75569 313 aaKnown RBP10.37□□□□□ -0.75
CCDC40-203ENST00000374877 ERAL1O75616 437 aaKnown RBP10.37□□□□□ -0.75
CCDC40-203ENST00000374877 SHC1P29353 583 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 PITPNBP48739 271 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 TSPAN31Q12999 210 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 RUNX3Q13761 415 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF322Q6U7Q0 402 aaPredicted RBP10.37□□□□□ -0.75
CCDC40-203ENST00000374877 LIPIQ6XZB0 460 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 CDH24Q86UP0 819 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 LRRC28Q86X40 367 aaPredicted RBP10.37□□□□□ -0.75
CCDC40-203ENST00000374877 FBXL6Q8N531 539 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 BEST4Q8NFU0 473 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 OR5AR1Q8NGP9 310 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 TEX12Q9BXU0 123 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 KCNN2Q9H2S1 579 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 CLEC4MQ9H2X3 399 aaPredicted RBP10.37□□□□□ -0.75
CCDC40-203ENST00000374877 OR51J1Q9H342 316 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 DPAGT1Q9H3H5 408 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 CYSLTR2Q9NS75 346 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 DEC1Q9P2X7 70 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 MRPS7Q9Y2R9 242 aaKnown RBP10.37□□□□□ -0.75
CCDC40-203ENST00000374877 LAMA2P24043 3122 aaKnown RBP10.37□□□□□ -0.75
CCDC40-203ENST00000374877 RGS9O75916 674 aaPredicted RBP10.37□□□□□ -0.75
CCDC40-203ENST00000374877 STATHP02808 62 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 CTSLP07711 333 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 POLR2CP19387 275 aaPredicted RBP10.37□□□□□ -0.75
CCDC40-203ENST00000374877 ACSL1P33121 698 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 NCBP2P52298 156 aaKnown RBP eCLIP10.37□□□□□ -0.75
CCDC40-203ENST00000374877 OR10A3P58181 314 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 KLHL12Q53G59 568 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 TMEM215Q68D42 235 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 FAM83HQ6ZRV2 1179 aaPredicted RBP10.37□□□□□ -0.75
CCDC40-203ENST00000374877 COMMD7Q86VX2 200 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 C12orf40Q86WS4 652 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 NUDT13Q86X67 352 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 FAM129CQ86XR2 697 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 AMER3Q8N944 861 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 MS4A8Q9BY19 250 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 GLIPR2Q9H4G4 154 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 CDCP1Q9H5V8 836 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 BEX1Q9HBH7 125 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 ASB6Q9NWX5 421 aa10.37□□□□□ -0.75
CCDC40-203ENST00000374877 CEP290O15078 2479 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 TEX51A0A1B0GUA7 166 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 PPM1DO15297 605 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 RNF13O43567 381 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 POP7O75817 140 aaKnown RBP10.36□□□□□ -0.75
CCDC40-203ENST00000374877 TPOP07202 933 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 AHCYP23526 432 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 AADACL4Q5VUY2 407 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 HBMQ6B0K9 141 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 ARL9Q6T311 187 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 ADCK2Q7Z695 626 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 SIRT6Q8N6T7 355 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 LSMEM1Q8N8F7 131 aa10.36□□□□□ -0.75
CCDC40-203ENST00000374877 BBS10Q8TAM1 723 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms