RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 SH3YL1Q96HL8 342 aaPredicted RBP8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 IL4I1Q96RQ9 567 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 ORAI3Q9BRQ5 295 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 MED18Q9BUE0 208 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 LRRC61Q9BV99 259 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 DUSP15Q9H1R2 295 aaPredicted RBP8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 PRO3102Q9H379 93 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 LTB4R2Q9NPC1 389 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 MAT2BQ9NZL9 334 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 GSTK1Q9Y2Q3 226 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 PCDHGB6Q9Y5F9 930 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 CDH10Q9Y6N8 788 aa8.12□□□□□ -1.11
SNRNP40-202ENST00000373720 NUP214P35658 2090 aaPredicted RBP8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 A0A0G2JN53 185 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 C2orf92A0A1B0GVN3 265 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 ANKRD33BA6NCL7 494 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 SLC22A31A6NKX4 558 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 LOC110117498-PIK3R3F6TDL0 507 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 PPM1DO15297 605 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 AQP9O43315 295 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 CHP2O43745 196 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 HCN1O60741 890 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 SEMA7AO75326 666 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 NADKO95544 446 aaPredicted RBP8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 IL1AP01583 271 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 EIF2S1P05198 315 aaKnown RBP8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 TNFRSF1BP20333 461 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 PTBP1P26599 531 aaKnown RBP eCLIP8.11□□□□□ -1.114e-9■□□□□ 10.7
SNRNP40-202ENST00000373720 POU1F1P28069 291 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 FGF9P31371 208 aaPredicted RBP8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 OMPP47874 163 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 MTNR1AP48039 350 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 MASP1P48740 699 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 AFF3P51826 1226 aaKnown RBP8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 CASP9P55211 416 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 WNT4P56705 351 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 VSX2P58304 361 aaPredicted RBP8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 NXPH1P58417 271 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 TAS2R43P59537 309 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 HSD11B2P80365 405 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 RUNX1T1Q06455 604 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 MGAT2Q10469 447 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 FUT7Q11130 342 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 DUSP5Q16690 384 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 C14orf28Q4W4Y0 310 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 TPRG1LQ5T0D9 272 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 PRPF38BQ5VTL8 546 aaKnown RBP8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 ANKRD34AQ69YU3 496 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 ULK3Q6PHR2 472 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 WDR74Q6RFH5 385 aaPredicted RBP8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 ISLR2Q6UXK2 745 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 Q6ZNX1 250 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 RTL4Q6ZR62 310 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 BMP8AQ7Z5Y6 402 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 BPHLQ86WA6 291 aaPredicted RBP8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 GPALPP1Q8IXQ4 340 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 POGLUT1Q8NBL1 392 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 OR6Q1Q8NGQ2 317 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 OR52N1Q8NH53 320 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 CCL4L1Q8NHW4 92 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 GPR151Q8TDV0 419 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 PIK3R3Q92569 461 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 COL26A1Q96A83 441 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 COX4I2Q96KJ9 171 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 DGAT2Q96PD7 388 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 CSF3RQ99062 836 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 DUSP23Q9BVJ7 150 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 TAPBPLQ9BX59 468 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 DCSTAMPQ9H295 470 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 EXOSC3Q9NQT5 275 aaKnown RBP8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 NDUFB11Q9NX14 153 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 GPR83Q9NYM4 423 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 HAO2Q9NYQ3 351 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 SUSD2Q9UGT4 822 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 SSR3Q9UNL2 185 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 EXOGQ9Y2C4 368 aaKnown RBP8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 MED31Q9Y3C7 131 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 PCDHGB7Q9Y5F8 929 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 PCDHGA3Q9Y5H0 932 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 LRP4O75096 1905 aa8.11□□□□□ -1.11
SNRNP40-202ENST00000373720 MN1Q10571 1320 aaPredicted RBP8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 LOC105369274A0A096LPK9 316 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 LOC102723532A0A0G2JNH3 316 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 OR6C76A6NM76 312 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 RHPN2P1A8MT19 583 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 M0R3H8 397 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 P2RX6O15547 441 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 TLX2O43763 284 aaPredicted RBP8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 DUX1O43812 170 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 AKAP8O43823 692 aaKnown RBP8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 FGF17O60258 216 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 ENTPD6O75354 484 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 IFNGP01579 166 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 TP53P04637 393 aaPredicted RBP8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 C8orf89P0DMQ9 161 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 ALPPL2P10696 532 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 PNMTP11086 282 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 POU2F1P14859 743 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 GLB1P16278 677 aa8.1□□□□□ -1.11
SNRNP40-202ENST00000373720 CPEP16870 476 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms