RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 TMEM255BQ8WV15 326 aa18.18■□□□□ 0.5
HDAC1-201ENST00000373548 PMM1Q92871 262 aa18.18■□□□□ 0.5
HDAC1-201ENST00000373548 VSTM2LQ96N03 204 aa18.18■□□□□ 0.5
HDAC1-201ENST00000373548 DGAT2Q96PD7 388 aa18.18■□□□□ 0.5
HDAC1-201ENST00000373548 ITPAQ9BY32 194 aa18.18■□□□□ 0.5
HDAC1-201ENST00000373548 DSN1Q9H410 356 aa18.18■□□□□ 0.5
HDAC1-201ENST00000373548 TVP23BQ9NYZ1 205 aa18.18■□□□□ 0.5
HDAC1-201ENST00000373548 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.18■□□□□ 0.5
HDAC1-201ENST00000373548 DTX4Q9Y2E6 619 aa18.18■□□□□ 0.5
HDAC1-201ENST00000373548 M0R082 166 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 FOXD2O60548 495 aaPredicted RBP18.17■□□□□ 0.5
HDAC1-201ENST00000373548 GKN3PP0CG01 181 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 HTR2AP28223 471 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 HSD17B7P56937 341 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 PLAURQ03405 335 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 ZNF267Q14586 743 aaPredicted RBP18.17■□□□□ 0.5
HDAC1-201ENST00000373548 AMZ1Q400G9 498 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 PRPF38BQ5VTL8 546 aaKnown RBP18.17■□□□□ 0.5
HDAC1-201ENST00000373548 RANBP3LQ86VV4 465 aaPredicted RBP18.17■□□□□ 0.5
HDAC1-201ENST00000373548 GAB3Q8WWW8 586 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 SLC7A7Q9UM01 511 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 LAMA1P25391 3075 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 ZNF749O43361 778 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 HYAL3O43820 417 aaPredicted RBP18.17■□□□□ 0.5
HDAC1-201ENST00000373548 PRKYO43930 277 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 PTHP01270 115 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 ADORA3P0DMS8 318 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 GLB1P16278 677 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 CSF2RBP32927 897 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 GPR3P46089 330 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 EMP3P54852 163 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 BNC1Q01954 994 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 SHBQ15464 509 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 ZNHIT3Q15649 155 aaPredicted RBP18.17■□□□□ 0.5
HDAC1-201ENST00000373548 TOR1AIP2Q8NFQ8 470 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 OR4N2Q8NGD1 307 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 OR8D4Q8NGM9 314 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 TBC1D15Q8TC07 691 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 Q96MT0 163 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 POLDIP3Q9BY77 421 aaKnown RBP18.17■□□□□ 0.5
HDAC1-201ENST00000373548 TAS2R16Q9NYV7 291 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 MAU2Q9Y6X3 613 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 CACNA1EQ15878 2313 aa18.17■□□□□ 0.5
HDAC1-201ENST00000373548 PIP5K1CO60331 668 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 SOX30O94993 753 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 IGKV1D-16P01601 117 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 PIPP12273 146 aaPredicted RBP18.16■□□□□ 0.5
HDAC1-201ENST00000373548 LIPAP38571 399 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 RFX3P48380 749 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 PCYT1AP49585 367 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 HSD11B2P80365 405 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 OCLNQ16625 522 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 RASSF6Q6ZTQ3 369 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 MBOAT2Q6ZWT7 520 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 BCDIN3DQ7Z5W3 292 aaKnown RBP18.16■□□□□ 0.5
HDAC1-201ENST00000373548 NRMQ8IXM6 262 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 Q8N9G6 341 aaPredicted RBP18.16■□□□□ 0.5
HDAC1-201ENST00000373548 PRSS27Q9BQR3 290 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 CDCA4Q9BXL8 241 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 NECTIN3Q9NQS3 549 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 CUTCQ9NTM9 273 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 RP1P56715 2156 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 TRAPPC13A5PLN9 417 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 TMEM150CB9EJG8 249 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 KLF4O43474 513 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 DUX1O43812 170 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 OR2B3O76000 313 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 CD36P16671 472 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 SMSP52788 366 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 EFNB1P98172 346 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 TIGD6Q17RP2 521 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 FLYWCH1Q4VC44 716 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 MFSD4BQ5TF39 518 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 PLAG1Q6DJT9 500 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 NPSR1Q6W5P4 371 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 LSRQ86X29 649 aaPredicted RBP18.16■□□□□ 0.5
HDAC1-201ENST00000373548 PLXDC1Q8IUK5 500 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 CARFQ8N187 725 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 FAM26EQ8N5C1 309 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 DEFB123Q8N688 67 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 TEX47Q8TBZ9 253 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 FGF11Q92914 225 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 CNPPD1Q9BV87 410 aa18.16■□□□□ 0.5
HDAC1-201ENST00000373548 A0A0C4DFX4 3053 aa18.15■□□□□ 0.5
HDAC1-201ENST00000373548 PRAMEF2O60811 474 aa18.15■□□□□ 0.5
HDAC1-201ENST00000373548 FPR3P25089 353 aa18.15■□□□□ 0.5
HDAC1-201ENST00000373548 GPR4P46093 362 aa18.15■□□□□ 0.5
HDAC1-201ENST00000373548 SNAP47Q5SQN1 464 aa18.15■□□□□ 0.5
HDAC1-201ENST00000373548 TTLL10Q6ZVT0 673 aa18.15■□□□□ 0.5
HDAC1-201ENST00000373548 POGLUT1Q8NBL1 392 aa18.15■□□□□ 0.5
HDAC1-201ENST00000373548 POLR2J2Q9GZM3 115 aaKnown RBP18.15■□□□□ 0.5
HDAC1-201ENST00000373548 MUTYHQ9UIF7 546 aa18.15■□□□□ 0.5
HDAC1-201ENST00000373548 ERVK-19Q9WJR5 959 aa18.15■□□□□ 0.5
HDAC1-201ENST00000373548 SLC22A1O15245 554 aa18.14■□□□□ 0.5
HDAC1-201ENST00000373548 TLX2O43763 284 aaPredicted RBP18.14■□□□□ 0.5
HDAC1-201ENST00000373548 LYPD3O95274 346 aa18.14■□□□□ 0.5
HDAC1-201ENST00000373548 GUSBP08236 651 aa18.14■□□□□ 0.5
HDAC1-201ENST00000373548 ARL4DP49703 201 aa18.14■□□□□ 0.5
HDAC1-201ENST00000373548 PGDP52209 483 aa18.14■□□□□ 0.5
HDAC1-201ENST00000373548 LSM3P62310 102 aaKnown RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms