RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 ARL9Q6T311 187 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 LRRC28Q86X40 367 aaPredicted RBP12.82□□□□□ -0.36
USP49-201ENST00000373006 FAM129CQ86XR2 697 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 VRK2Q86Y07 508 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 GNPDA2Q8TDQ7 276 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 UBE2E3Q969T4 207 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 RADILQ96JH8 1075 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 EQTNQ9NQ60 294 aa12.82□□□□□ -0.36
USP49-201ENST00000373006 A0A1W2PPK0 400 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 SURF4O15260 269 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 PI15O43692 258 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 DRD5P21918 477 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 CST5P28325 142 aaPredicted RBP12.81□□□□□ -0.36
USP49-201ENST00000373006 NCBP2P52298 156 aaKnown RBP eCLIP12.81□□□□□ -0.36
USP49-201ENST00000373006 METAP1P53582 386 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 ERVFC1P60507 584 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 FUT5Q11128 374 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 TSPAN31Q12999 210 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 SMARCD3Q6STE5 483 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 ESPNLQ6ZVH7 1005 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 SORCS2Q96PQ0 1159 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 PHF11Q9UIL8 331 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 CHST2Q9Y4C5 530 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 NUMA1Q14980 2115 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 A0A0B4J203 849 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 POP7O75817 140 aaKnown RBP12.81□□□□□ -0.36
USP49-201ENST00000373006 HMGN2P05204 90 aaKnown RBP12.81□□□□□ -0.36
USP49-201ENST00000373006 ACSL1P33121 698 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 CTAG1AP78358 180 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 CRYZQ08257 329 aaKnown RBP12.81□□□□□ -0.36
USP49-201ENST00000373006 MFSD13AQ14CX5 517 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 SLC25A35Q3KQZ1 300 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 ARHGAP15Q53QZ3 475 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 HBMQ6B0K9 141 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 SYT9Q86SS6 491 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 OAFQ86UD1 273 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 PIAS4Q8N2W9 510 aaPredicted RBP12.81□□□□□ -0.36
USP49-201ENST00000373006 VN1R2Q8NFZ6 395 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 CACNG6Q9BXT2 260 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 CHIAQ9BZP6 476 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 CLEC4MQ9H2X3 399 aaPredicted RBP12.81□□□□□ -0.36
USP49-201ENST00000373006 DPAGT1Q9H3H5 408 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 HINT3Q9NQE9 182 aaKnown RBP12.81□□□□□ -0.36
USP49-201ENST00000373006 CBLCQ9ULV8 474 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 ASB4Q9Y574 426 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 KNL1Q8NG31 2342 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 A0A1W2PS29 197 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 OR5K3A6NET4 321 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 E9PI62 339 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 SSNA1O43805 119 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 PIP5K1CO60331 668 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 RGS9O75916 674 aaPredicted RBP12.81□□□□□ -0.36
USP49-201ENST00000373006 CFL1P23528 166 aaKnown RBP12.81□□□□□ -0.36
USP49-201ENST00000373006 EPHA5P54756 1037 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 SLC3A1Q07837 685 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 SLC36A2Q495M3 483 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 ZNF311Q5JNZ3 666 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 PLBD1Q6P4A8 553 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 C17orf107Q6ZR85 190 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 RASSF6Q6ZTQ3 369 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 SIAH3Q8IW03 269 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 NRMQ8IXM6 262 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 ZNF687Q8N1G0 1237 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 TOMM5Q8N4H5 51 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 LINC00471Q8N535 108 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 FAM83CQ9BQN1 747 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 EMC7Q9NPA0 242 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 WASH6PQ9NQA3 447 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 ASB6Q9NWX5 421 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 TMEM5Q9Y2B1 443 aa12.81□□□□□ -0.36
USP49-201ENST00000373006 C7orf66A4D0T2 115 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 FUT1P19526 365 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 DNASE1P24855 282 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 SLC16A1P53985 500 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 SP3Q02447 781 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 GRK1Q15835 563 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 AANATQ16613 207 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 ST3GAL2Q16842 350 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 KLHL12Q53G59 568 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 TMEM81Q6P7N7 255 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 FAM83HQ6ZRV2 1179 aaPredicted RBP12.8□□□□□ -0.36
USP49-201ENST00000373006 C17orf64Q86WR6 236 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 CCDC116Q8IYX3 515 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 TRMT10AQ8TBZ6 339 aaKnown RBP12.8□□□□□ -0.36
USP49-201ENST00000373006 ACOT12Q8WYK0 555 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 AMDHD1Q96NU7 426 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 TRMT61BQ9BVS5 477 aaKnown RBP12.8□□□□□ -0.36
USP49-201ENST00000373006 MS4A8Q9BY19 250 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 PCYT1BQ9Y5K3 369 aaPredicted RBP12.8□□□□□ -0.36
USP49-201ENST00000373006 FZD7O75084 574 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 REM1O75628 298 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 FGBP02675 491 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 MT-ND4P03905 459 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 THBS2P35442 1172 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 OMPP47874 163 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 CAMK2DQ13557 499 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 GPR139Q6DWJ6 353 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 SFXN4Q6P4A7 337 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 RPTNQ6XPR3 784 aa12.8□□□□□ -0.36
USP49-201ENST00000373006 ADCK2Q7Z695 626 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms