RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 NENFQ9UMX5 172 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 A0A0J9YY10 115 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 FAM230AA0A1W2PPH8 454 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 RNASET2O00584 256 aaKnown RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 RAB3DO95716 219 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 PCGF2P35227 344 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 PITX1P78337 314 aaPredicted RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 ADARB1P78563 741 aaKnown RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 GPR50Q13585 617 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 RAB33AQ14088 237 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 FAM69AQ5T7M9 428 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 MSI2Q96DH6 328 aaKnown RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 TRMT2BQ96GJ1 504 aaKnown RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 APIPQ96GX9 242 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 FAM71F1Q96KD3 344 aaPredicted RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 RIMS3Q9UJD0 308 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 C10orf71Q711Q0 1435 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 LOC102725191A0A1B0GVB3 256 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 A0A1W2PQL4 384 aaPredicted RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 C17orf105B2RV13 164 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 AKAIN1P0CW23 69 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 AQP2P41181 271 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 IDH3GP51553 393 aaPredicted RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 ARSDP51689 593 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 SELENOWP63302 87 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 HTD2P86397 168 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 GLO1Q04760 184 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 KEAP1Q14145 624 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 CBARPQ8N350 705 aaPredicted RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 IQCF1Q8N6M8 205 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 ACBD4Q8NC06 268 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 PAPD5Q8NDF8 572 aaKnown RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 NETO1Q8TDF5 533 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 CHRDQ9H2X0 955 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 ASF1BQ9NVP2 202 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 ARMC1Q9NVT9 282 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 GJD2Q9UKL4 321 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 F8W036 122 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 BLOC1S1P78537 153 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 TLDC1Q6P9B6 456 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 LMO3Q8TAP4 145 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 BADQ92934 168 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 CASD1Q96PB1 797 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 MYADMQ96S97 322 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 CRB3Q9BUF7 120 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 IGSF5Q9NSI5 407 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 SDHAF2Q9NX18 166 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 TEX10Q9NXF1 929 aaPredicted RBP10.9□□□□□ -0.66
VCL-202ENST00000372755 SLC35A3Q9Y2D2 325 aa10.9□□□□□ -0.66
VCL-202ENST00000372755 BLACEA4D250 179 aa10.9□□□□□ -0.67
VCL-202ENST00000372755 MEF2DQ14814 521 aa10.9□□□□□ -0.67
VCL-202ENST00000372755 NKPD1Q17RQ9 610 aa10.9□□□□□ -0.67
VCL-202ENST00000372755 PROX2Q3B8N5 592 aa10.9□□□□□ -0.67
VCL-202ENST00000372755 RPS26P11Q5JNZ5 115 aaPredicted RBP10.9□□□□□ -0.67
VCL-202ENST00000372755 CDHR3Q6ZTQ4 885 aa10.9□□□□□ -0.67
VCL-202ENST00000372755 S100A7AQ86SG5 101 aa10.9□□□□□ -0.67
VCL-202ENST00000372755 WDTC1Q8N5D0 677 aa10.9□□□□□ -0.67
VCL-202ENST00000372755 ADAMTS16Q8TE57 1224 aa10.9□□□□□ -0.67
VCL-202ENST00000372755 FAM3CQ92520 227 aa10.9□□□□□ -0.67
VCL-202ENST00000372755 FOXRED1Q96CU9 486 aaPredicted RBP10.9□□□□□ -0.67
VCL-202ENST00000372755 BORCS6Q96GS4 357 aa10.9□□□□□ -0.67
VCL-202ENST00000372755 CERS1P27544 350 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 BMPR1AP36894 532 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 SGSHP51688 502 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 BMXP51813 675 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 RPL23AP62750 156 aaKnown RBP10.89□□□□□ -0.67
VCL-202ENST00000372755 C18orf21Q32NC0 220 aaPredicted RBP10.89□□□□□ -0.67
VCL-202ENST00000372755 TP53I3Q53FA7 332 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 IER5LQ5T953 404 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 DCP2Q8IU60 420 aaKnown RBP10.89□□□□□ -0.67
VCL-202ENST00000372755 NAGSQ8N159 534 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 MAL2Q969L2 176 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 NDUFAF4Q9P032 175 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 ACAD8Q9UKU7 415 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 CACNG2Q9Y698 323 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 LTBP3Q9NS15 1303 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 SNNO75324 88 aaPredicted RBP10.89□□□□□ -0.67
VCL-202ENST00000372755 ZNF888P0CJ79 500 aaPredicted RBP10.89□□□□□ -0.67
VCL-202ENST00000372755 FUT1P19526 365 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 S100A7P31151 101 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 NUDT1P36639 197 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 RTP2Q5QGT7 225 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 CPOQ8IVL8 374 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 TCTEX1D2Q8WW35 142 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 HCAR1Q9BXC0 346 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 DUOX1Q9NRD9 1551 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 SULT1C2O00338 296 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 MITFO75030 526 aaPredicted RBP10.89□□□□□ -0.67
VCL-202ENST00000372755 TFP02787 698 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 SFTPDP35247 375 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 NCS1P62166 190 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 VEZF1Q14119 521 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 KIR2DS3Q14952 304 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 ISCA2Q86U28 154 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 TMEM239Q8WW34 195 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 DEDD2Q8WXF8 326 aa10.89□□□□□ -0.67
VCL-202ENST00000372755 CDCA3Q99618 268 aaPredicted RBP10.89□□□□□ -0.67
VCL-202ENST00000372755 RDH14Q9HBH5 336 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms