RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 FAM83HQ6ZRV2 1179 aaPredicted RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 KANSL1Q7Z3B3 1105 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 VRK3Q8IV63 474 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 LILRA3Q8N6C8 439 aaPredicted RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 OR5H6Q8NGV6 325 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 OR2L2Q8NH16 312 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 ACOT12Q8WYK0 555 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 UFD1Q92890 307 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 FUZQ9BT04 418 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 EFCAB11Q9BUY7 163 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 KATNB1Q9BVA0 655 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 POLR2J3Q9H1A7 115 aaKnown RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 TRIM45Q9H8W5 580 aaPredicted RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 TAS2R7Q9NYW3 318 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 DNAJC27Q9NZQ0 273 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 TBC1D29Q9UFV1 150 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 NUP50Q9UKX7 468 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 AUP1Q9Y679 476 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 KCNE2Q9Y6J6 123 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 DNMT3AQ9Y6K1 912 aaPredicted RBP10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 CSNK1G3Q9Y6M4 447 aa10.73□□□□□ -0.69
TSPAN1-201ENST00000372003 OTOGLQ3ZCN5 2332 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 PCDH15Q96QU1 1955 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 TRBV4-1A0A0J9YWV2 114 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 A0A0X1KG70 313 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 FAM240BA0A1B0GVZ2 78 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 A0A1W2PRB8 838 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 B4DGG1 531 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 FFAR1O14842 300 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 PLD2O14939 933 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 PRKYO43930 277 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 EML2O95834 649 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 ALPPL2P10696 532 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 HK1P19367 917 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 GSTM3P21266 225 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 HOXD11P31277 338 aaPredicted RBP10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 GRK6P43250 576 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 EVX1P49640 407 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 LIM2P55344 173 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 RPS13P62277 151 aaKnown RBP10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 DDX39BQ13838 428 aaKnown RBP10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 PUM1Q14671 1186 aaKnown RBP eCLIP10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 GANABQ14697 944 aaKnown RBP10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 SLC5A12Q1EHB4 618 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 BTBD16Q32M84 506 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 HSD17B12Q53GQ0 312 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 PGBD2Q6P3X8 592 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 SLCO4C1Q6ZQN7 724 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 NLGN4YQ8NFZ3 816 aaPredicted RBP10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 C16orf78Q8WTQ4 265 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 PATE1Q8WXA2 126 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 AKAP1Q92667 903 aaKnown RBP eCLIP10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 FGF11Q92914 225 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 UBL7Q96S82 380 aaPredicted RBP10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 TIMM29Q9BSF4 260 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 NLNQ9BYT8 704 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 NLGN3Q9NZ94 848 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 POLHQ9Y253 713 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 RNF215Q9Y6U7 377 aa10.72□□□□□ -0.69
TSPAN1-201ENST00000372003 DNAH14Q0VDD8 3507 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 NUP214P35658 2090 aaPredicted RBP10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 A0A1W2PQ72 361 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 C12orf71A8MTZ7 269 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 ARHGEF33A8MVX0 844 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 C5orf58C9J3I9 102 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 FLRT2O43155 660 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 SIGLEC6O43699 453 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 OR10H3O60404 316 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 ACP2P11117 423 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 ARSBP15848 533 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 PREPP48147 710 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 MAN2A2P49641 1150 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 ABATP80404 500 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 CDK5Q00535 292 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 C2orf80Q0P641 193 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 NAE1Q13564 534 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 HIST2H2AA3Q6FI13 130 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 C22orf42Q6IC83 251 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 CEACAM20Q6UY09 585 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 DBX2Q6ZNG2 339 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 MRGPREQ86SM8 312 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 NAXDQ8IW45 347 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 TRIM48Q8IWZ4 208 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 SDR16C5Q8N3Y7 309 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 Q8N402 240 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 TCEANCQ8N8B7 351 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 ATP6V1C2Q8NEY4 427 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 OR4K1Q8NGD4 311 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 OR4C6Q8NH72 309 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 ZDHHC1Q8WTX9 485 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 NR4A3Q92570 626 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 UBE2E3Q969T4 207 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 NEURL3Q96EH8 262 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 LINC00615Q96LM1 132 aaPredicted RBP10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 ZNF354BQ96LW1 612 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 GPR137Q96N19 417 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 QRFPRQ96P65 431 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 OR4K3Q96R72 315 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 DUSP23Q9BVJ7 150 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms