RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 KLF10Q13118 480 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 NFYCQ13952 458 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 ARHGAP11BQ3KRB8 267 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 COX20Q5RI15 118 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 LRIF1Q5T3J3 769 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 FNDC7Q5VTL7 733 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 OR5M10Q6IEU7 315 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 MARCH3Q86UD3 253 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 PLCZ1Q86YW0 608 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 SPPL2CQ8IUH8 684 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 GATSQ8NAP1 163 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 CHDHQ8NE62 594 aaPredicted RBP13.54□□□□□ -0.24
COL9A1-204ENST00000370496 PRR7Q8TB68 274 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 TSPEARQ8WU66 669 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 SDF2Q99470 211 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 HOXD1Q9GZZ0 328 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 SLC52A3Q9NQ40 469 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 QPCTLQ9NXS2 382 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 ARMCX1Q9P291 453 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 P2RX2Q9UBL9 471 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 OSGIN2Q9Y236 505 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 WDR45Q9Y484 360 aa13.54□□□□□ -0.24
COL9A1-204ENST00000370496 TMEM247A6NEH6 219 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 C17orf51A8MQB3 221 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 ALG1L2C9J202 215 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 CLIC1O00299 241 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 SLC22A2O15244 555 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 NDUFB5O43674 189 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 SNX3O60493 162 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 SLC19A2O60779 497 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 WISP2O76076 250 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 ANGPTL1O95841 491 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 ETFAP13804 333 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 HOXB9P17482 250 aaPredicted RBP13.53□□□□□ -0.24
COL9A1-204ENST00000370496 PPIBP23284 216 aaKnown RBP13.53□□□□□ -0.24
COL9A1-204ENST00000370496 GAS1P54826 345 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 CASP6P55212 293 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 DSTNP60981 165 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 FUT5Q11128 374 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 SLC10A1Q14973 349 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 GPR68Q15743 365 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 MMEL1Q495T6 779 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 HEPHL1Q6MZM0 1159 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 ARHGAP11AQ6P4F7 1023 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 SNX32Q86XE0 403 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 WDSUB1Q8N9V3 476 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 OR4C3Q8NH37 302 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 ROPN1LQ96C74 230 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 ZNF350Q9GZX5 532 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 SLC6A15Q9H2J7 730 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 UBQLN3Q9H347 655 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 HHATLQ9HCP6 504 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 SLC25A37Q9NYZ2 338 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 CORO2BQ9UQ03 480 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 LIPT1Q9Y234 373 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 HRH3Q9Y5N1 445 aa13.53□□□□□ -0.24
COL9A1-204ENST00000370496 TRGV5A0A0B4J1U4 118 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 A0A1B0GTH9 108 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 BBIP1A8MTZ0 92 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 H3BNH8 94 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 GMFGO60234 142 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 KIAA0513O60268 411 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 CBR3O75828 277 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 H6PDO95479 791 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 IGHG3P01860 377 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 NR2F1P10589 423 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 ADSLP30566 484 aaPredicted RBP13.52□□□□□ -0.25
COL9A1-204ENST00000370496 GCKP35557 465 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 RNF144AP50876 292 aaPredicted RBP13.52□□□□□ -0.25
COL9A1-204ENST00000370496 FADDQ13158 208 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 EIF2S3LQ2VIR3 472 aaKnown RBP13.52□□□□□ -0.25
COL9A1-204ENST00000370496 APOOLQ6UXV4 268 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 TRILQ7L0X0 811 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 OLIG3Q7RTU3 272 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 ZGRF1Q86YA3 2104 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 MISPQ8IVT2 679 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 MSRB3Q8IXL7 192 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 OR14L1PQ8NHC6 308 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 NTNG2Q96CW9 530 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 POLE3Q9NRF9 147 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 THUMPD1Q9NXG2 353 aaKnown RBP13.52□□□□□ -0.25
COL9A1-204ENST00000370496 VAPAQ9P0L0 249 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 SLAMF8Q9P0V8 285 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 SH3BGRL2Q9UJC5 107 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 FBXL2Q9UKC9 423 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 MKLN1Q9UL63 735 aa13.52□□□□□ -0.25
COL9A1-204ENST00000370496 RP1L1Q8IWN7 2480 aaPredicted RBP13.52□□□□□ -0.25
COL9A1-204ENST00000370496 C15orf38-AP3S2A0A0A6YYH1 394 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 A0A1W2PQD3 144 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 EVPLLA8MZ36 301 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 MRASO14807 208 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 ZNHIT1O43257 154 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 FCMRO60667 390 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 HCN1O60741 890 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 TNFRSF21O75509 655 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 HPNP05981 417 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 BCHEP06276 602 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 TPOP07202 933 aa13.51□□□□□ -0.25
COL9A1-204ENST00000370496 TCEA1P23193 301 aaKnown RBP13.51□□□□□ -0.25
COL9A1-204ENST00000370496 PTGS2P35354 604 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms