RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 ENTPD4Q9Y227 616 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 TDRD6O60522 2096 aaKnown RBP8.32□□□□□ -1.08
THBS3-201ENST00000368378 TRANK1O15050 2925 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 C4orf51C9J302 202 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 H0YC42 278 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 ARHGEF9O43307 516 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 SOD1P00441 154 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 ADRB3P13945 408 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 CLDN12P56749 244 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 EEF1A2Q05639 463 aaKnown RBP8.32□□□□□ -1.08
THBS3-201ENST00000368378 CDK10Q15131 360 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 FAAP20Q6NZ36 180 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 C9orf43Q8TAL5 461 aaPredicted RBP8.32□□□□□ -1.08
THBS3-201ENST00000368378 HERVK_113Q902F9 699 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 PDXPQ96GD0 296 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 ORAI3Q9BRQ5 295 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 CDCA4Q9BXL8 241 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 OR2B2Q9GZK3 357 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 ABCG5Q9H222 651 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 TMEM38AQ9H6F2 299 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 ANKHQ9HCJ1 492 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 MYNNQ9NPC7 610 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 NANSQ9NR45 359 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 SPHK1Q9NYA1 384 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 NLGN3Q9NZ94 848 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 SERGEFQ9UGK8 458 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 SPATA2Q9UM82 520 aa8.32□□□□□ -1.08
THBS3-201ENST00000368378 TTC28Q96AY4 2481 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 HYKKA2RU49 373 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 MID1O15344 667 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 LYRM1O43325 122 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 GATBO75879 557 aaKnown RBP8.31□□□□□ -1.08
THBS3-201ENST00000368378 OR2B3O76000 313 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 KCNJ5P48544 419 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 CCR6P51684 374 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 CCR8P51685 355 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 PCBP3P57721 371 aaKnown RBP8.31□□□□□ -1.08
THBS3-201ENST00000368378 C21orf58P58505 322 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 DCDC1P59894 354 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 B2MP61769 119 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 GALK2Q01415 458 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 OC90Q02509 493 aaPredicted RBP8.31□□□□□ -1.08
THBS3-201ENST00000368378 ZNF33BQ06732 778 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 TGM3Q08188 693 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.31□□□□□ -1.08
THBS3-201ENST00000368378 ARHGAP15Q53QZ3 475 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 ZNF770Q6IQ21 691 aaPredicted RBP8.31□□□□□ -1.08
THBS3-201ENST00000368378 CDC73Q6P1J9 531 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 CNKSR3Q6P9H4 555 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 KLHDC8AQ8IYD2 350 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 ELMOD2Q8IZ81 293 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 FBXL6Q8N531 539 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 LINC01555Q8NAE3 123 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 PFN4Q8NHR9 129 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 ADAMTS15Q8TE58 950 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 SUSD6Q92537 303 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 SLC25A46Q96AG3 418 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 CNRIP1Q96F85 164 aaPredicted RBP8.31□□□□□ -1.08
THBS3-201ENST00000368378 MRGPRX3Q96LB0 322 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 TOX2Q96NM4 488 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 MOGAT1Q96PD6 335 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 MCHR1Q99705 422 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 HCAR1Q9BXC0 346 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 SIRT3Q9NTG7 399 aaPredicted RBP8.31□□□□□ -1.08
THBS3-201ENST00000368378 FBXO34Q9NWN3 711 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 SLC7A7Q9UM01 511 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 MAPRE3Q9UPY8 281 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 MGAT4BQ9UQ53 548 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 CHST2Q9Y4C5 530 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 FAM186AA6NE01 2351 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 ERVH48-1M5A8F1 160 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 BTN3A3O00478 584 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 FAAHO00519 579 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 CDC42EP2O14613 210 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 TMEM127O75204 238 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 HRGP04196 525 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 YES1P07947 543 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 ADH5P11766 374 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 PCSK2P16519 638 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 BSGP35613 385 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 PDX1P52945 283 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 ILKQ13418 452 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 SFRP4Q6FHJ7 346 aaPredicted RBP8.31□□□□□ -1.08
THBS3-201ENST00000368378 CCDC149Q6ZUS6 474 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 DPPA4Q7L190 304 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 ANKRD33Q7Z3H0 272 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 SFTPA2Q8IWL1 248 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 TOR1AIP2Q8NFQ8 470 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 OR8K3Q8NH51 312 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 CDS1Q92903 461 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 SLC38A2Q96QD8 506 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 PPIL3Q9H2H8 161 aaKnown RBP8.31□□□□□ -1.08
THBS3-201ENST00000368378 FN3KQ9H479 309 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 SYNPO2LQ9H987 977 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 SLC35C2Q9NQQ7 365 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 DEC1Q9P2X7 70 aa8.31□□□□□ -1.08
THBS3-201ENST00000368378 ARHGEF17Q96PE2 2063 aaPredicted RBP8.31□□□□□ -1.08
THBS3-201ENST00000368378 NCOR1O75376 2440 aa8.3□□□□□ -1.08
THBS3-201ENST00000368378 A0A1B0GVT2 93 aa8.3□□□□□ -1.08
THBS3-201ENST00000368378 A0A1W2PR48 441 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms