RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CXXC5Q7LFL8 322 aaKnown RBP13.33□□□□□ -0.28
CD48-201ENST00000368045 VN1R4Q7Z5H5 301 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 CACUL1Q86Y37 369 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 GATAD2AQ86YP4 633 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 Q8N402 240 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 ASCC1Q8N9N2 400 aaKnown RBP13.33□□□□□ -0.28
CD48-201ENST00000368045 DUSP18Q8NEJ0 188 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 ATP6V1C2Q8NEY4 427 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 OR7G2Q8NG99 324 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 OR4K14Q8NGD5 310 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 NEIL3Q8TAT5 605 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 LCN9Q8WX39 176 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 BADQ92934 168 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 OR2M4Q96R27 311 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 SERINC2Q96SA4 455 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 SECISBP2Q96T21 854 aaKnown RBP13.33□□□□□ -0.28
CD48-201ENST00000368045 KCNN2Q9H2S1 579 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 UBQLN3Q9H347 655 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 EVA1AQ9H8M9 152 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 INPP5EQ9NRR6 644 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 RBFOX1Q9NWB1 397 aaKnown RBP13.33□□□□□ -0.28
CD48-201ENST00000368045 MOSPD1Q9UJG1 213 aa13.33□□□□□ -0.28
CD48-201ENST00000368045 NDRG2Q9UN36 371 aaKnown RBP13.33□□□□□ -0.28
CD48-201ENST00000368045 TRAPPC13A5PLN9 417 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 URADA6NGE7 173 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 UNC119BA6NIH7 251 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 FMO6PO60774 539 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 RGS9O75916 674 aaPredicted RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 CH25HO95992 272 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 YES1P07947 543 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 SLC35G6P0C7Q6 338 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 ZNF888P0CJ79 500 aaPredicted RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 CELP19835 753 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 TCEA1P23193 301 aaKnown RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 TLX1P31314 330 aaPredicted RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 KIR2DL3P43628 341 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 GCGRP47871 477 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 MTNR1BP49286 362 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 EOGTQ5NDL2 527 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 FAM111BQ6SJ93 734 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 ZNF836Q6ZNA1 936 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 GET4Q7L5D6 327 aaPredicted RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 SPRED2Q7Z698 418 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 C11orf74Q86VG3 221 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 GALNT12Q8IXK2 581 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 YAF2Q8IY57 180 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 ACBD7Q8N6N7 88 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 ZFP41Q8N8Y5 198 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 SLC16A11Q8NCK7 471 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 TMEM255BQ8WV15 326 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 SPRYD4Q8WW59 207 aaPredicted RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 PMM1Q92871 262 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 CDS1Q92903 461 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 OTULINQ96BN8 352 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 TMED9Q9BVK6 235 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 SYNPO2LQ9H987 977 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 HINT3Q9NQE9 182 aaKnown RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 KCMF1Q9P0J7 381 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 KLF15Q9UIH9 416 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 KLHL21Q9UJP4 597 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 SLC7A7Q9UM01 511 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 HEATR5BQ9P2D3 2071 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 SGK494L7N484 410 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 HPGDSO60760 199 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 DBIP07108 87 aaKnown RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 IFI6P09912 130 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 SMIM10L1P0DMW3 83 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 ZNF10P21506 573 aaPredicted RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 RPS4Y1P22090 263 aaKnown RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 APEX1P27695 318 aaKnown RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 CAPZA2P47755 286 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 ZNF136P52737 540 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 KIAA1024LP59773 190 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 HOXC5Q00444 222 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 SF3A2Q15428 464 aaKnown RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 ZNF791Q3KP31 576 aaPredicted RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 TIGD3Q6B0B8 471 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 USP53Q70EK8 1073 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 MEPCEQ7L2J0 689 aaKnown RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 CPOQ8IVL8 374 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 OR52L1Q8NGH7 329 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 ASB12Q8WXK4 309 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 KCTD12Q96CX2 325 aaKnown RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 TM4SF19Q96DZ7 209 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 SMIM10Q96HG1 83 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 SAMD8Q96LT4 415 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 GDF15Q99988 308 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 ZNF350Q9GZX5 532 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 PIGUQ9H490 435 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 TBC1D17Q9HA65 648 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 ZNF223Q9UK11 482 aaPredicted RBP13.32□□□□□ -0.28
CD48-201ENST00000368045 FBXL21Q9UKT6 434 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 SATB2Q9UPW6 733 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 TMEM5Q9Y2B1 443 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 NTNG1Q9Y2I2 539 aa13.32□□□□□ -0.28
CD48-201ENST00000368045 TRPM6Q9BX84 2022 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 PIP5K1CO60331 668 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 PAICSP22234 425 aaKnown RBP13.31□□□□□ -0.28
CD48-201ENST00000368045 KIR2DS3Q14952 304 aa13.31□□□□□ -0.28
CD48-201ENST00000368045 TRAM1Q15629 374 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms