RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CLEC2DQ9UHP7 191 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 SATB2Q9UPW6 733 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 CLCA2Q9UQC9 943 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 KIF26BQ2KJY2 2108 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 ZNF462Q96JM2 2506 aa10.79□□□□□ -0.68
USF1-201ENST00000368019 A0A0B4J293 547 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 KDM4EB2RXH2 506 aaPredicted RBP10.78□□□□□ -0.68
USF1-201ENST00000368019 M0R129 80 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 ATXN7O15265 892 aaPredicted RBP10.78□□□□□ -0.68
USF1-201ENST00000368019 BRINP1O60477 761 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 SDC3O75056 442 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 C1QL1O75973 258 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 KLHL18O94889 574 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 SLC16A8O95907 504 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 POU2F1P14859 743 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 HK1P19367 917 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 DDCP20711 480 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 AZGP1P25311 298 aaKnown RBP10.78□□□□□ -0.68
USF1-201ENST00000368019 SOAT1P35610 550 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 IFNGR2P38484 337 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 ANXA11P50995 505 aaKnown RBP10.78□□□□□ -0.68
USF1-201ENST00000368019 RRAS2P62070 204 aaPredicted RBP10.78□□□□□ -0.68
USF1-201ENST00000368019 TBPL1P62380 186 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 TRA2BP62995 288 aaKnown RBP10.78□□□□□ -0.68
USF1-201ENST00000368019 E2F1Q01094 437 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 TP53BP2Q13625 1128 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.78□□□□□ -0.68
USF1-201ENST00000368019 PYDC2Q56P42 97 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 SYT14P1Q58G82 188 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 SNAP47Q5SQN1 464 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 SIGIRRQ6IA17 410 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 NXPE4Q6UWF7 544 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 CEACAM20Q6UY09 585 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 LRRC69Q6ZNQ3 347 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 FAM83HQ6ZRV2 1179 aaPredicted RBP10.78□□□□□ -0.68
USF1-201ENST00000368019 DPPA4Q7L190 304 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 FAM109AQ8N4B1 249 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 OR4C6Q8NH72 309 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 BBS10Q8TAM1 723 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 ZNF480Q8WV37 535 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 SLC5A11Q8WWX8 675 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 NEIL2Q969S2 332 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 ARRDC3Q96B67 414 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 CREB3L1Q96BA8 519 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 RNF31Q96EP0 1072 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 MED8Q96G25 268 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 DMRTB1Q96MA1 342 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 ZNF582Q96NG8 517 aaPredicted RBP10.78□□□□□ -0.68
USF1-201ENST00000368019 ARHGAP9Q9BRR9 750 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 TTYH2Q9BSA4 534 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 TMEM43Q9BTV4 400 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 KATNB1Q9BVA0 655 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 MMP28Q9H239 520 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 FOLH1BQ9HBA9 442 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 BCL2L10Q9HD36 194 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 MIEF1Q9NQG6 463 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 ACSS1Q9NUB1 689 aaPredicted RBP10.78□□□□□ -0.68
USF1-201ENST00000368019 MED17Q9NVC6 651 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 UCKL1Q9NWZ5 548 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 ADAM29Q9UKF5 820 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 CBLCQ9ULV8 474 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 MAP4K5Q9Y4K4 846 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 TENM4Q6N022 2769 aa10.78□□□□□ -0.68
USF1-201ENST00000368019 TEX51A0A1B0GUA7 166 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 A0A1W2PQU0 124 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 A6NL46 340 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 H3BN98 237 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 PLD2O14939 933 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 CASC3O15234 703 aaKnown RBP10.77□□□□□ -0.69
USF1-201ENST00000368019 SHOXO15266 292 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 SLC31A1O15431 190 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 RRP8O43159 456 aaKnown RBP10.77□□□□□ -0.69
USF1-201ENST00000368019 NME6O75414 186 aaPredicted RBP10.77□□□□□ -0.69
USF1-201ENST00000368019 PIAS2O75928 621 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 MT-CO3P00414 261 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 PRB1P04280 392 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 HLA-DPB1P04440 258 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 THEGLP0DJG4 465 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 NPPBP16860 134 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 POU1F1P28069 291 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 BDKRB1P46663 353 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 GIPRP48546 466 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 EVX1P49640 407 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 ARFIP1P53367 373 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 AP2S1P53680 142 aaPredicted RBP10.77□□□□□ -0.69
USF1-201ENST00000368019 TAS2R50P59544 299 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 GNA13Q14344 377 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 SF1Q15637 639 aaKnown RBP10.77□□□□□ -0.69
USF1-201ENST00000368019 TATDN3Q17R31 274 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 CCDC58Q4VC31 144 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 LIPKQ5VXJ0 399 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 CDCP2Q5VXM1 449 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 RFLNAQ6ZTI6 216 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 TRILQ7L0X0 811 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 HDDC2Q7Z4H3 204 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 TECPR1Q7Z6L1 1165 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 ABI3BPQ7Z7G0 1075 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 SLC9B2Q86UD5 537 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 KRT78Q8N1N4 520 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 GHDCQ8N2G8 530 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms