RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 TMEM19Q96HH6 336 aa11.34□□□□□ -0.59
CAPN9-203ENST00000366666 WDR77Q9BQA1 342 aaPredicted RBP11.34□□□□□ -0.59
CAPN9-203ENST00000366666 ACTRT3Q9BYD9 372 aa11.34□□□□□ -0.59
CAPN9-203ENST00000366666 OR10A5Q9H207 317 aa11.34□□□□□ -0.59
CAPN9-203ENST00000366666 TMEM38AQ9H6F2 299 aa11.34□□□□□ -0.59
CAPN9-203ENST00000366666 GORASP2Q9H8Y8 452 aa11.34□□□□□ -0.59
CAPN9-203ENST00000366666 FBXO34Q9NWN3 711 aa11.34□□□□□ -0.59
CAPN9-203ENST00000366666 USE1Q9NZ43 259 aa11.34□□□□□ -0.59
CAPN9-203ENST00000366666 CLCA3PQ9Y6N3 262 aa11.34□□□□□ -0.59
CAPN9-203ENST00000366666 LAMA5O15230 3695 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 TMEM229AB2RXF0 380 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 IGKV3-11P04433 115 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 CHRM4P08173 479 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 PCGF2P35227 344 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 MAP3K8P41279 467 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 GSSP48637 474 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 SLC37A1P57057 533 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 CDK6Q00534 326 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 ZIK1Q3SY52 487 aaPredicted RBP11.33□□□□□ -0.6
CAPN9-203ENST00000366666 SMUG1Q53HV7 270 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 C6orf141Q5SZD1 244 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 CDC73Q6P1J9 531 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 BHLHB9Q6PI77 547 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 TMPRSS7Q7RTY8 843 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 STK32CQ86UX6 486 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 PEX5LQ8IYB4 626 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 LGI4Q8N135 537 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 ZSCAN1Q8NBB4 408 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 C11orf65Q8NCR3 313 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 POP5Q969H6 163 aaKnown RBP11.33□□□□□ -0.6
CAPN9-203ENST00000366666 ZG16BQ96DA0 208 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 NUDT9Q9BW91 350 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 QRSL1Q9H0R6 528 aaKnown RBP11.33□□□□□ -0.6
CAPN9-203ENST00000366666 WDR54Q9H977 334 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 FOLH1BQ9HBA9 442 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 FAM118AQ9NWS6 357 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 DNAJB9Q9UBS3 223 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 GPN3Q9UHW5 284 aaPredicted RBP11.33□□□□□ -0.6
CAPN9-203ENST00000366666 CORINQ9Y5Q5 1042 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 GXYLT2A0PJZ3 443 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 CLDN25C9JDP6 229 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 G3V2T6 193 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 J3QRK9 145 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 FCMRO60667 390 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 SERPINA1P01009 418 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 MT-ND1P03886 318 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 HOXB6P17509 224 aaKnown RBP11.33□□□□□ -0.6
CAPN9-203ENST00000366666 KDELR2P33947 212 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 KHKP50053 298 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 GPR143P51810 404 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 ZNF155Q12901 538 aaPredicted RBP11.33□□□□□ -0.6
CAPN9-203ENST00000366666 ITGADQ13349 1161 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 ATP1A4Q13733 1029 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 TGIF1Q15583 401 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 CYP27C1Q4G0S4 372 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 TMEM164Q5U3C3 297 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 NPSR1Q6W5P4 371 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 BPIFB6Q8NFQ5 453 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 OR52E4Q8NGH9 312 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 MUL1Q969V5 352 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 FAM162AQ96A26 154 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 VSTM2LQ96N03 204 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 LMF1Q96S06 567 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 WDR12Q9GZL7 423 aaKnown RBP11.33□□□□□ -0.6
CAPN9-203ENST00000366666 ADNPQ9H2P0 1102 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 A4GALTQ9NPC4 353 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 ZNF223Q9UK11 482 aaPredicted RBP11.33□□□□□ -0.6
CAPN9-203ENST00000366666 AP3M1Q9Y2T2 418 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 PCDHGA8Q9Y5G5 932 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 NOX1Q9Y5S8 564 aa11.33□□□□□ -0.6
CAPN9-203ENST00000366666 MRPS18BQ9Y676 258 aaKnown RBP11.33□□□□□ -0.6
CAPN9-203ENST00000366666 A8MVJ9 347 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 C9J4A7 227 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 GALNSP34059 522 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 GABRA3P34903 492 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 VEZF1Q14119 521 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 TMEM205Q6UW68 189 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 ZAR1Q86SH2 424 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 IGFN1Q86VF2 1251 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 ANKRD13BQ86YJ7 626 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 CACTIN-AS1Q8N1I8 211 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 OR2Y1Q8NGV0 311 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 ADAMTS15Q8TE58 950 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 S100ZQ8WXG8 99 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 SH3YL1Q96HL8 342 aaPredicted RBP11.32□□□□□ -0.6
CAPN9-203ENST00000366666 RBM4BQ9BQ04 359 aaKnown RBP11.32□□□□□ -0.6
CAPN9-203ENST00000366666 TREX2Q9BQ50 279 aaPredicted RBP11.32□□□□□ -0.6
CAPN9-203ENST00000366666 RBM4Q9BWF3 364 aaKnown RBP11.32□□□□□ -0.6
CAPN9-203ENST00000366666 OSBPL10Q9BXB5 764 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 ITPAQ9BY32 194 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 MROQ9BYG7 248 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 NRSN2Q9GZP1 204 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 TOR3AQ9H497 397 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 HMG20AQ9NP66 347 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 ASCL3Q9NQ33 180 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 CARD8Q9Y2G2 431 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 SNX5Q9Y5X3 404 aa11.32□□□□□ -0.6
CAPN9-203ENST00000366666 LOC101059948A0A1B0GTJ6 334 aa11.31□□□□□ -0.6
CAPN9-203ENST00000366666 CDRT15L2A8MXV6 281 aa11.31□□□□□ -0.6
CAPN9-203ENST00000366666 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms