RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 ZSCAN5BA6NJL1 495 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 WASHC1A8K0Z3 465 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 TRIM49D1C9J1S8 452 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 C19orf81C9J6K1 198 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 FCN1O00602 326 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 STX11O75558 287 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 BAG2O95816 211 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 IGLV1-47P01700 117 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 IGHV3-23P01764 117 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 CA3P07451 260 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 CD55P08174 381 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 ANXA3P12429 323 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 NTSP30990 170 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 EPHX2P34913 555 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 YBEYP58557 167 aaPredicted RBP2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 BDH1Q02338 343 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 ZNF154Q13106 437 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 EXOSC2Q13868 293 aaKnown RBP2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 TFDP1Q14186 410 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 CAPRIN1Q14444 709 aaKnown RBP2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 SBK1Q52WX2 424 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 SULT1C3Q6IMI6 304 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 RAB12Q6IQ22 244 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 LEG1Q6P5S2 330 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 PAQR9Q6ZVX9 377 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 C1orf186Q6ZWK4 172 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 KDM8Q8N371 416 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 ALLCQ8N6M5 410 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 STKLD1Q8NE28 680 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 GIPC3Q8TF64 312 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 DCUN1D4Q92564 292 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 FRAT1Q92837 279 aaPredicted RBP2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 NEIL2Q969S2 332 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 UPRTQ96BW1 309 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 TMEM80Q96HE8 168 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 IL4I1Q96RQ9 567 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 WRAP53Q9BUR4 548 aaKnown RBP2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 TBC1D10AQ9BXI6 508 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 RAB17Q9H0T7 212 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 ROPN1Q9HAT0 212 aaPredicted RBP2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 YAE1D1Q9NRH1 226 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 EHFQ9NZC4 300 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 CNOT2Q9NZN8 540 aaKnown RBP2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 L3MBTL1Q9Y468 752 aa2.38□□□□□ -2.03
RNU4-1-201ENST00000363925 ANKRD30BQ9BXX2 1392 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 FAM74A7A6NL05 159 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 WASH3PC4AMC7 463 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 ABCD4O14678 606 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 SCRG1O75711 98 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 GPX5O75715 221 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 TGFAP01135 160 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 MT-ND3P03897 115 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 RRASP10301 218 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 H2AFXP16104 143 aaPredicted RBP2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 FUT3P21217 361 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 PAICSP22234 425 aaKnown RBP2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 ADORA2BP29275 332 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 GCKP35557 465 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 MTTPP55157 894 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 RGS1Q08116 209 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 FAM74A3Q4VXF1 159 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 OR2B11Q5JQS5 317 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 SPATA46Q5T0L3 261 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 IRGCQ6NXR0 463 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 WASH2PQ6VEQ5 465 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 ZNF589Q86UQ0 364 aaPredicted RBP2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 EFCAB13Q8IY85 973 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 ARL10Q8N8L6 244 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 CNIH3Q8TBE1 160 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 CCDC47Q96A33 483 aaKnown RBP2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 C18orf25Q96B23 403 aaPredicted RBP2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 PINX1Q96BK5 328 aaKnown RBP2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 FGGYQ96C11 551 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 GSDMCQ9BYG8 508 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 COG4Q9H9E3 785 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 NANOGQ9H9S0 305 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 POLD4Q9HCU8 107 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 FANCFQ9NPI8 374 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 RDH8Q9NYR8 311 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 ATP6V1HQ9UI12 483 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 CRLS1Q9UJA2 301 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 KNSTRNQ9Y448 316 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 GMPPBQ9Y5P6 360 aa2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 SPAG9O60271 1321 aaKnown RBP2.37□□□□□ -2.03
RNU4-1-201ENST00000363925 RNF103-CHMP3A0A140T963 221 aa2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 E9PMD0 336 aa2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 SGK494L7N484 410 aa2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 TM9SF1O15321 606 aa2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 LATO43561 262 aa2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 RAMP1O60894 148 aa2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 MMP23AO75900 390 aa2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 UQCRBP14927 111 aa2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 STMN1P16949 149 aa2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 ATP5A1P25705 553 aaKnown RBP2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 RPL29P47914 159 aaKnown RBP2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 RND3P61587 244 aa2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 NTHL1P78549 312 aa2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 NUCB2P80303 420 aa2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 VLDLRP98155 873 aa2.36□□□□□ -2.03
RNU4-1-201ENST00000363925 CKAP4Q07065 602 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms