RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 ZNF782Q6ZMW2 699 aaPredicted RBP12.84□□□□□ -0.35
SGMS1-202ENST00000361781 GET4Q7L5D6 327 aaPredicted RBP12.84□□□□□ -0.35
SGMS1-202ENST00000361781 UBE2Q1Q7Z7E8 422 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 OR5W2Q8NH69 310 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 C4orf36Q96KX1 117 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 TMEM5Q9Y2B1 443 aa12.84□□□□□ -0.35
SGMS1-202ENST00000361781 TRBV5-4A0A0C4DH59 114 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 GTPBP1O00178 669 aaKnown RBP12.83□□□□□ -0.36
SGMS1-202ENST00000361781 PIP5K1CO60331 668 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 ARL6IP5O75915 188 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 SLCO2B1O94956 709 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 PPP1R3DO95685 299 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 RHOP08100 348 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 FUT1P19526 365 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 AHCYP23526 432 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 PTPN6P29350 595 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 GZMKP49863 264 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 CLDN22Q8N7P3 220 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 KIAA1958Q8N8K9 716 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 HSPA12BQ96MM6 686 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 PCBD2Q9H0N5 130 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 TMEM38AQ9H6F2 299 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 SLAMF7Q9NQ25 335 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 PRDM9Q9NQV7 894 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 DIMT1Q9UNQ2 313 aaKnown RBP12.83□□□□□ -0.36
SGMS1-202ENST00000361781 CIB4A0PJX0 185 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 HEPACAM2A8MVW5 462 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 GABRA5P31644 462 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 OR10A3P58181 314 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 RAE1P78406 368 aaKnown RBP12.83□□□□□ -0.36
SGMS1-202ENST00000361781 EFR3AQ14156 821 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 MRPL58Q14197 206 aaKnown RBP12.83□□□□□ -0.36
SGMS1-202ENST00000361781 IRF3Q14653 427 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 PON3Q15166 354 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 SCGB2B2Q4G0G5 96 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 ENTPD8Q5MY95 495 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 KIAA1324Q6UXG2 1013 aaKnown RBP12.83□□□□□ -0.36
SGMS1-202ENST00000361781 PMEPA1Q969W9 287 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 PRRC1Q96M27 445 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 SRMSQ9H3Y6 488 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 GLIPR2Q9H4G4 154 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 SYNPO2LQ9H987 977 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 AKAP7Q9P0M2 348 aaPredicted RBP12.83□□□□□ -0.36
SGMS1-202ENST00000361781 MYEF2Q9P2K5 600 aaKnown RBP12.83□□□□□ -0.36
SGMS1-202ENST00000361781 A0A1W2PRQ8 180 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 ARPC1BO15143 372 aaKnown RBP12.83□□□□□ -0.36
SGMS1-202ENST00000361781 ZNF780AO75290 641 aaPredicted RBP12.83□□□□□ -0.36
SGMS1-202ENST00000361781 ZNF10P21506 573 aaPredicted RBP12.83□□□□□ -0.36
SGMS1-202ENST00000361781 CRYBB2P43320 205 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 SLC6A11P48066 632 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 PRLHRP49683 370 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 METAP1P53582 386 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 CRYZQ08257 329 aaKnown RBP12.83□□□□□ -0.36
SGMS1-202ENST00000361781 ASAH1Q13510 395 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 FXNQ16595 210 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 TMEM44Q2T9K0 475 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 OLFML2AQ68BL7 652 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 CHST4Q8NCG5 386 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 GALNT6Q8NCL4 622 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 OR56A3Q8NH54 315 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 DNAJA4Q8WW22 397 aaPredicted RBP12.83□□□□□ -0.36
SGMS1-202ENST00000361781 ORAI1Q96D31 301 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 GPR174Q9BXC1 333 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 POLDIP3Q9BY77 421 aaKnown RBP12.83□□□□□ -0.36
SGMS1-202ENST00000361781 NDUFB11Q9NX14 153 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 CDH10Q9Y6N8 788 aa12.83□□□□□ -0.36
SGMS1-202ENST00000361781 CACNB4O00305 520 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-202ENST00000361781 HIST1H2ABP04908 130 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 AK4P27144 223 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-202ENST00000361781 MRPL19P49406 292 aaKnown RBP12.82□□□□□ -0.36
SGMS1-202ENST00000361781 RAB33AQ14088 237 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 GPR176Q14439 515 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 HSD17B12Q53GQ0 312 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 HIST3H2AQ7L7L0 130 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 GPR135Q8IZ08 494 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 HIST1H2ACQ93077 130 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 UCN3Q969E3 161 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 TM4SF18Q96CE8 201 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 SRA1Q9HD15 236 aaKnown RBP12.82□□□□□ -0.36
SGMS1-202ENST00000361781 DNMT3BQ9UBC3 853 aaKnown RBP12.82□□□□□ -0.36
SGMS1-202ENST00000361781 RCE1Q9Y256 329 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 UNC119BA6NIH7 251 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 TMPRSS11DO60235 418 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 SYN1P17600 705 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 CD79BP40259 229 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 MLLT3P42568 568 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-202ENST00000361781 RFX2P48378 723 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 POU6F2P78424 691 aaPredicted RBP12.82□□□□□ -0.36
SGMS1-202ENST00000361781 ALKAL2Q6UX46 152 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 ACOT4Q8N9L9 421 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 SDR9C7Q8NEX9 313 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 TMEM255BQ8WV15 326 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 PDXPQ96GD0 296 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 OR52D1Q9H346 318 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 BABAM2Q9NXR7 383 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 KCNE1BA0A087WTH5 132 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 OR6C74A6NCV1 312 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 HMGN4O00479 90 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 EMC8O43402 210 aa12.82□□□□□ -0.36
SGMS1-202ENST00000361781 TFP02787 698 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms