RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 RAB8BQ92930 207 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 BADQ92934 168 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 OR5M11Q96RB7 305 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 TAPBPLQ9BX59 468 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 RNF167Q9H6Y7 350 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 CLN6Q9NWW5 311 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 TAS2R16Q9NYV7 291 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 MGAT4BQ9UQ53 548 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 WDR37Q9Y2I8 494 aa6.84□□□□□ -1.31
CLCN3-202ENST00000360642 ISPDA4D126 451 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 ISM1B1AKI9 464 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 GPR89AB7ZAQ6 455 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 ANHXE9PGG2 379 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 FAAHO00519 579 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 KMOO15229 486 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 UPK1BO75841 260 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 GPR89BP0CG08 455 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 CCT3P49368 545 aaKnown RBP6.84□□□□□ -1.32
CLCN3-202ENST00000360642 DGKEP52429 567 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 MLF2Q15773 248 aaPredicted RBP6.84□□□□□ -1.32
CLCN3-202ENST00000360642 AGBL4Q5VU57 503 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 SLX4IPQ5VYV7 408 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 C12orf73Q69YU5 71 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 OR4C11Q6IEV9 310 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 RBM45Q8IUH3 476 aaKnown RBP6.84□□□□□ -1.32
CLCN3-202ENST00000360642 TAGAPQ8N103 731 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 CADM3Q8N126 398 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 AMER2Q8N7J2 671 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 ZBTB8BQ8NAP8 495 aaPredicted RBP6.84□□□□□ -1.32
CLCN3-202ENST00000360642 RASSF5Q8WWW0 418 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 CFHR4Q92496 578 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 TEFMQ96QE5 360 aaKnown RBP6.84□□□□□ -1.32
CLCN3-202ENST00000360642 TREX2Q9BQ50 279 aaPredicted RBP6.84□□□□□ -1.32
CLCN3-202ENST00000360642 UCK2Q9BZX2 261 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 MBNL1Q9NR56 388 aaKnown RBP6.84□□□□□ -1.32
CLCN3-202ENST00000360642 ACSL5Q9ULC5 683 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 A4GNTQ9UNA3 340 aa6.84□□□□□ -1.32
CLCN3-202ENST00000360642 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.84□□□□□ -1.32
CLCN3-202ENST00000360642 LRIT2A6NDA9 550 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 TBC1D3BA6NDS4 549 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 OR1F1O43749 312 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 CNOT3O75175 753 aaKnown RBP6.83□□□□□ -1.32
CLCN3-202ENST00000360642 ENTPD6O75354 484 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 CD72P21854 359 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 TEAD1P28347 426 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 TRIM23P36406 574 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 CLCNKAP51800 687 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 PRKCDQ05655 676 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 PRDX1Q06830 199 aaKnown RBP6.83□□□□□ -1.32
CLCN3-202ENST00000360642 CDC20Q12834 499 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 DNASE1L3Q13609 305 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 DCST1Q5T197 706 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 ZNF529Q6P280 563 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 SYT13Q7L8C5 426 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 COMTD1Q86VU5 262 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 TBC1D19Q8N5T2 526 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 KBTBD8Q8NFY9 601 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 OR2A1Q8NGT9 310 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 HERVK_113Q902F9 699 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 FGF13Q92913 245 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 EXOSC8Q96B26 276 aaKnown RBP6.83□□□□□ -1.32
CLCN3-202ENST00000360642 CHFRQ96EP1 664 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 FAM210AQ96ND0 272 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 MGLLQ99685 303 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 GLIPR2Q9H4G4 154 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 QPCTLQ9NXS2 382 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 EHD3Q9NZN3 535 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 TMCC3Q9ULS5 477 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 LSM2Q9Y333 95 aaKnown RBP6.83□□□□□ -1.32
CLCN3-202ENST00000360642 TLR4O00206 839 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 PPM1DO15297 605 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 H1F0P07305 194 aaKnown RBP6.83□□□□□ -1.32
CLCN3-202ENST00000360642 IGFBP1P08833 259 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-202ENST00000360642 FCARP24071 287 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 ETV6P41212 452 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 UGT2B15P54855 530 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 ZIC1Q15915 447 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 SSX1Q16384 188 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 SYPL1Q16563 259 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 ZNF181Q2M3W8 571 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 FAM46CQ5VWP2 391 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 RNLSQ5VYX0 342 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 ZNF793Q6ZN11 406 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 WDR53Q7Z5U6 358 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-202ENST00000360642 ADGRD2Q7Z7M1 963 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 IL17RCQ8NAC3 791 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 AMDHD1Q96NU7 426 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 ZNF607Q96SK3 696 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 DPH7Q9BTV6 452 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 TRPV4Q9HBA0 871 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 FSCN3Q9NQT6 498 aa6.83□□□□□ -1.32
CLCN3-202ENST00000360642 LOC100506127A0A0U1RQW1 187 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 A0A1W2PRQ8 180 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SAGE2PA6NJ88 616 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 EPPINO95925 133 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 SLC35G4P0C7Q5 338 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 ZNF888P0CJ79 500 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 OR12D1P0DN82 309 aa6.82□□□□□ -1.32
CLCN3-202ENST00000360642 DBTP11182 482 aaKnown RBP6.82□□□□□ -1.32
CLCN3-202ENST00000360642 ENDOUP21128 410 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms