RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 AMBRA1Q9C0C7 1298 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 QRSL1Q9H0R6 528 aaKnown RBP12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 Q9H521 79 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 MKLN1Q9UL63 735 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 ZNF443Q9Y2A4 671 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 DTX4Q9Y2E6 619 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 AK5Q9Y6K8 562 aa12.82□□□□□ -0.36
PDLIM5-203ENST00000359265 TRABD2BA6NFA1 517 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 PRAMEF25A6NGN4 478 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 FRG2CA6NGY1 282 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 AGAP5A6NIR3 686 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 FCMRO60667 390 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 LGI1O95970 557 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 CCNYL3P0C7X3 344 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 CT45A8P0DMV1 189 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 CT45A9P0DMV2 189 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 IL7RP16871 459 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 RRM2P31350 389 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 PIGAP37287 484 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 PPICP45877 212 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 IST1P53990 364 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 PSMD4P55036 377 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 DAG1Q14118 895 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 NCF4Q15080 339 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 CT45A2Q5DJT8 189 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 OTUD3Q5T2D3 398 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 C6orf15Q6UXA7 325 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 ZNF517Q6ZMY9 492 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 TSEN54Q7Z6J9 526 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 HMGN2P46Q86SG4 172 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 VRK2Q86Y07 508 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 NRBF2Q96F24 287 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 ZNF597Q96LX8 424 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 PIP5K1AQ99755 562 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 ARHGDIGQ99819 225 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 OSBPL10Q9BXB5 764 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 GABARAPL1Q9H0R8 117 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 EVA1AQ9H8M9 152 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 POLR1BQ9H9Y6 1135 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 VNN3Q9NY84 501 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 CBLCQ9ULV8 474 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 LRCH1Q9Y2L9 728 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 GPR55Q9Y2T6 319 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 PCDHGA10Q9Y5H3 936 aa12.81□□□□□ -0.36
PDLIM5-203ENST00000359265 COL12A1Q99715 3063 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 SDK2Q58EX2 2172 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 M0R3H8 397 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 PCDH17O14917 1159 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 TNFSF15O95150 251 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 DLGAP3O95886 979 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 UQCRBP14927 111 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 DRD5P21918 477 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 CD82P27701 267 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 RFX3P48380 749 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 FOXL2P58012 376 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 EBPQ15125 230 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 NNATQ16517 81 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 DECR1Q16698 335 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 FLYWCH1Q4VC44 716 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 WLSQ5T9L3 541 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 RNF220Q5VTB9 566 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 AP1ARQ63HQ0 302 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 PAPD4Q6PIY7 484 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 TMEM205Q6UW68 189 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 DEF8Q6ZN54 512 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 ZNF836Q6ZNA1 936 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 TMPRSS7Q7RTY8 843 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 CPEB2Q7Z5Q1 589 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 ZNF321PQ8N8H1 164 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 B3GNT7Q8NFL0 401 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 NR4A3Q92570 626 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 NAF1Q96HR8 494 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 LCORQ96JN0 433 aaPredicted RBP12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 GAL3ST4Q96RP7 486 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 LPAR4Q99677 370 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 RBM4BQ9BQ04 359 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 RBM4Q9BWF3 364 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 OSBPL11Q9BXB4 747 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 ARMC7Q9H6L4 198 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 USE1Q9NZ43 259 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 MRTO4Q9UKD2 239 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 RAB26Q9ULW5 256 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 PTRH2Q9Y3E5 179 aaKnown RBP12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 TESMINQ9Y4I5 508 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 U3KQV3 271 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 KNTC1P50748 2209 aa12.8□□□□□ -0.36
PDLIM5-203ENST00000359265 NPIPA5A0A0B4J1W7 369 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 IGHV3-20A0A0C4DH32 117 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 C2orf92A0A1B0GVN3 265 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 C9orf172C9J069 976 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 NPIPA7E9PJI5 369 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 TNFRSF11BO00300 401 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 GADD45GO95257 159 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 IGHEP01854 428 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 NPIPA8P0DM63 369 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 NID1P14543 1247 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 RBMS1P29558 406 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 FOLR3P41439 243 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 YAP1P46937 504 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 ALDH3A2P51648 485 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms