RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 MGLLQ99685 303 aa13.86□□□□□ -0.19
GABPB1-202ENST00000359031 PRR14Q9BWN1 585 aa13.86□□□□□ -0.19
GABPB1-202ENST00000359031 MND1Q9BWT6 205 aa13.86□□□□□ -0.19
GABPB1-202ENST00000359031 PLA2G12AQ9BZM1 189 aa13.86□□□□□ -0.19
GABPB1-202ENST00000359031 SLIRPQ9GZT3 109 aaKnown RBP13.86□□□□□ -0.19
GABPB1-202ENST00000359031 ARMC7Q9H6L4 198 aa13.86□□□□□ -0.19
GABPB1-202ENST00000359031 EGLN3Q9H6Z9 239 aa13.86□□□□□ -0.19
GABPB1-202ENST00000359031 CCDC59Q9P031 241 aaKnown RBP13.86□□□□□ -0.19
GABPB1-202ENST00000359031 FBXL21Q9UKT6 434 aa13.86□□□□□ -0.19
GABPB1-202ENST00000359031 ERGIC3Q9Y282 383 aa13.86□□□□□ -0.19
GABPB1-202ENST00000359031 MRPS33Q9Y291 106 aaKnown RBP13.86□□□□□ -0.19
GABPB1-202ENST00000359031 LSM2Q9Y333 95 aaKnown RBP13.86□□□□□ -0.19
GABPB1-202ENST00000359031 CACNA1HO95180 2353 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 CCRL2O00421 344 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 KLF4O43474 513 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 TLX2O43763 284 aaPredicted RBP13.85□□□□□ -0.19
GABPB1-202ENST00000359031 NKX2-2O95096 273 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 CBX7O95931 251 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 ZNF136P52737 540 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 UBXN2BQ14CS0 331 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 EXOSC7Q15024 291 aaKnown RBP13.85□□□□□ -0.19
GABPB1-202ENST00000359031 SNAPC1Q16533 368 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 TMEM44Q2T9K0 475 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 ANKDD1AQ495B1 522 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 ACSM5Q6NUN0 579 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 C17orf82Q86X59 251 aaPredicted RBP13.85□□□□□ -0.19
GABPB1-202ENST00000359031 NKAIN4Q8IVV8 208 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 CYP4Z2PQ8N1L4 340 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 TMCO5AQ8N6Q1 288 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 OR6C4Q8NGE1 309 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 GPR151Q8TDV0 419 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 PIK3R3Q92569 461 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 ZNF582Q96NG8 517 aaPredicted RBP13.85□□□□□ -0.19
GABPB1-202ENST00000359031 ZNF285Q96NJ3 590 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 DACH2Q96NX9 599 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 OR5M11Q96RB7 305 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 SLC38A3Q99624 504 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 LMF2Q9BU23 707 aaKnown RBP13.85□□□□□ -0.19
GABPB1-202ENST00000359031 TAPBPLQ9BX59 468 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 TEX12Q9BXU0 123 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 C14orf105Q9NVL8 296 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 TESQ9UGI8 421 aaKnown RBP13.85□□□□□ -0.19
GABPB1-202ENST00000359031 DIMT1Q9UNQ2 313 aaKnown RBP13.85□□□□□ -0.19
GABPB1-202ENST00000359031 A3GALT2U3KPV4 340 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 PMF1-BGLAPU3KQ54 211 aa13.85□□□□□ -0.19
GABPB1-202ENST00000359031 CENPVL1A0A0U1RR11 272 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 TRAPPC13A5PLN9 417 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 PRODHO43272 600 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 BRINP1O60477 761 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 NSA2O95478 260 aaKnown RBP13.84□□□□□ -0.19
GABPB1-202ENST00000359031 RAB36O95755 333 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 THY1P04216 161 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 SCG5P05408 212 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 HSMCR30P0CW71 290 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 IDUAP35475 653 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 LIMK1P53667 647 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 IGLV3-21P80748 117 aaPredicted RBP13.84□□□□□ -0.19
GABPB1-202ENST00000359031 HOXC5Q00444 222 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 FZD5Q13467 585 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 FAM53BQ14153 422 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 MAPK14Q16539 360 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 TSTQ16762 297 aaKnown RBP13.84□□□□□ -0.19
GABPB1-202ENST00000359031 MRPL2Q5T653 305 aaKnown RBP13.84□□□□□ -0.19
GABPB1-202ENST00000359031 GARNL3Q5VVW2 1013 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 Q6ZNX1 250 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 GALNT12Q8IXK2 581 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 ZNF595Q8IYB9 648 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 SDR16C5Q8N3Y7 309 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 POGLUT1Q8NBL1 392 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 OR52R1Q8NGF1 315 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 OR8D4Q8NGM9 314 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 LRR1Q96L50 414 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 CHRNA10Q9GZZ6 450 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 DSN1Q9H410 356 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 ZBTB20Q9HC78 741 aaPredicted RBP13.84□□□□□ -0.19
GABPB1-202ENST00000359031 MRPS18AQ9NVS2 196 aaKnown RBP13.84□□□□□ -0.19
GABPB1-202ENST00000359031 NLGN3Q9NZ94 848 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 CNIH4Q9P003 139 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 SLC7A7Q9UM01 511 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 NTNG1Q9Y2I2 539 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 CORINQ9Y5Q5 1042 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 TP53BP1Q12888 1972 aaPredicted RBP13.84□□□□□ -0.19
GABPB1-202ENST00000359031 SCN2AQ99250 2005 aa13.84□□□□□ -0.19
GABPB1-202ENST00000359031 A0A0A6YYC8 382 aaPredicted RBP13.83□□□□□ -0.2
GABPB1-202ENST00000359031 CDHR4A6H8M9 788 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 KDM4EB2RXH2 506 aaPredicted RBP13.83□□□□□ -0.2
GABPB1-202ENST00000359031 I3L1I5 382 aaPredicted RBP13.83□□□□□ -0.2
GABPB1-202ENST00000359031 J3QRK9 145 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 CSO75390 466 aaKnown RBP13.83□□□□□ -0.2
GABPB1-202ENST00000359031 CTSBP07858 339 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 ENDOUP21128 410 aaKnown RBP13.83□□□□□ -0.2
GABPB1-202ENST00000359031 GABRA3P34903 492 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 GRK5P34947 590 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 MLLT3P42568 568 aaPredicted RBP13.83□□□□□ -0.2
GABPB1-202ENST00000359031 C1DQ13901 141 aaKnown RBP13.83□□□□□ -0.2
GABPB1-202ENST00000359031 ZNHIT3Q15649 155 aaPredicted RBP13.83□□□□□ -0.2
GABPB1-202ENST00000359031 KLHL22Q53GT1 634 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 ZNF620Q6ZNG0 422 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 IGFN1Q86VF2 1251 aa13.83□□□□□ -0.2
GABPB1-202ENST00000359031 NRMQ8IXM6 262 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms