RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 MLLT1Q03111 559 aaPredicted RBP16.54■□□□□ 0.24
RTN4-204ENST00000357732 ARHGEF6Q15052 776 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 FNDC3BQ53EP0 1204 aaKnown RBP16.54■□□□□ 0.24
RTN4-204ENST00000357732 PIP5KL1Q5T9C9 394 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 PYHIN1Q6K0P9 492 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 HEPHL1Q6MZM0 1159 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 RPL13AP3Q6NVV1 102 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 C16orf62Q7Z3J2 963 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 VRK2Q86Y07 508 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 LRRC17Q8N6Y2 441 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 NUP43Q8NFH3 380 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 OR2L5Q8NG80 312 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 OR2A1Q8NGT9 310 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 SLC41A3Q96GZ6 507 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 THAP7Q9BT49 309 aaPredicted RBP16.54■□□□□ 0.24
RTN4-204ENST00000357732 HDAC8Q9BY41 377 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 AICDAQ9GZX7 198 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 OSGEPL1Q9H4B0 414 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 CKAP5Q14008 2032 aa16.54■□□□□ 0.24
RTN4-204ENST00000357732 MUC22E2RYF6 1773 aaPredicted RBP16.54■□□□□ 0.24
RTN4-204ENST00000357732 A0A0X1KG70 313 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 HRO43593 1189 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 SERPIND1P05546 499 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 M6PRP20645 277 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 ATP5A1P25705 553 aaKnown RBP16.53■□□□□ 0.24
RTN4-204ENST00000357732 TRHRP34981 398 aaPredicted RBP16.53■□□□□ 0.24
RTN4-204ENST00000357732 ESCO2Q56NI9 601 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 FAM209AQ5JX71 171 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 OLIG3Q7RTU3 272 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 GDF7Q7Z4P5 450 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 ADGRD2Q7Z7M1 963 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 CCDC28AQ8IWP9 274 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 NRMQ8IXM6 262 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 CCDC116Q8IYX3 515 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 C9orf62Q8N4C0 152 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 ACOT4Q8N9L9 421 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 OR4M2Q8NGB6 313 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 ELP4Q96EB1 424 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 MCHR1Q99705 422 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 C1QTNF2Q9BXJ5 285 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 HINT3Q9NQE9 182 aaKnown RBP16.53■□□□□ 0.24
RTN4-204ENST00000357732 CHST2Q9Y4C5 530 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 IGKV1-8A0A0C4DH67 115 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 C2orf92A0A1B0GVN3 265 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 CH25HO95992 272 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 GCGRP47871 477 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 EIPR1Q53HC9 387 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 IDNKQ5T6J7 187 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 MEPCEQ7L2J0 689 aaKnown RBP16.53■□□□□ 0.24
RTN4-204ENST00000357732 RNF113BQ8IZP6 322 aaKnown RBP16.53■□□□□ 0.24
RTN4-204ENST00000357732 OR2L8Q8NGY9 312 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 GANCQ8TET4 914 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 NXPE3Q969Y0 559 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 SCMH1Q96GD3 660 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 C16orf58Q96GQ5 468 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 LRRC3BQ96PB8 259 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 QRSL1Q9H0R6 528 aaKnown RBP16.53■□□□□ 0.24
RTN4-204ENST00000357732 MED28Q9H204 178 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 GALNT9Q9HCQ5 603 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 IMP3Q9NV31 184 aaKnown RBP16.53■□□□□ 0.24
RTN4-204ENST00000357732 NTMQ9P121 344 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 GPR55Q9Y2T6 319 aaPredicted RBP16.53■□□□□ 0.24
RTN4-204ENST00000357732 ATG4BQ9Y4P1 393 aa16.53■□□□□ 0.24
RTN4-204ENST00000357732 C1QTNF3-AMACRE9PGA6 284 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 PGRMC2O15173 223 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 ERI3O43414 337 aaKnown RBP16.52■□□□□ 0.24
RTN4-204ENST00000357732 CHP2O43745 196 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 AIFM1O95831 613 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 PEPDP12955 493 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 AHCYP23526 432 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 EVI2BP34910 448 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 RAG2P55895 527 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 GALEQ14376 348 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 C6orf132Q5T0Z8 1188 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 SIGIRRQ6IA17 410 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 NIPAL3Q6P499 406 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 NKAIN4Q8IVV8 208 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 SIRT6Q8N6T7 355 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 GPR137Q96N19 417 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 GFM1Q96RP9 751 aaKnown RBP16.52■□□□□ 0.24
RTN4-204ENST00000357732 ALG8Q9BVK2 526 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 MTHFD2LQ9H903 347 aaPredicted RBP16.52■□□□□ 0.24
RTN4-204ENST00000357732 ZNF275Q9NSD4 429 aaPredicted RBP16.52■□□□□ 0.24
RTN4-204ENST00000357732 LYARQ9NX58 379 aaKnown RBP16.52■□□□□ 0.24
RTN4-204ENST00000357732 NUBP2Q9Y5Y2 271 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 CACNG2Q9Y698 323 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 KCNE3Q9Y6H6 103 aa16.52■□□□□ 0.24
RTN4-204ENST00000357732 A0A0G2JN53 185 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 PLPP2O43688 288 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 PLOD3O60568 738 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 CLTBP09497 229 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 STOMP27105 288 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 BCL6P41182 706 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 CLCNKAP51800 687 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 ZBTB37Q5TC79 503 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 CD276Q5ZPR3 534 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 MEX3DQ86XN8 651 aaKnown RBP16.52■□□□□ 0.23
RTN4-204ENST00000357732 CPOQ8IVL8 374 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 ETFBKMTQ8IXQ9 262 aa16.52■□□□□ 0.23
RTN4-204ENST00000357732 TEX19Q8NA77 164 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms