RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ERVK-25P63136 954 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 SHC2P98077 582 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 OR7G1Q8NGA0 311 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 TMEM239Q8WW34 195 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 ATG12O94817 140 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 PFKMP08237 780 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 SYN1P17600 705 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 IL4RP24394 825 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 POU4F3Q15319 338 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 ZNF704Q6ZNC4 412 aaPredicted RBP14.02□□□□□ -0.16
CHD4-201ENST00000357008 FAM83FQ8NEG4 500 aaPredicted RBP14.02□□□□□ -0.16
CHD4-201ENST00000357008 LILRB4Q8NHJ6 448 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 BRIX1Q8TDN6 353 aaKnown RBP14.02□□□□□ -0.16
CHD4-201ENST00000357008 GGHQ92820 318 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 CLMPQ9H6B4 373 aa14.02□□□□□ -0.16
CHD4-201ENST00000357008 KCNJ8Q15842 424 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 FAM180BQ6P0A1 224 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 ACBD4Q8NC06 268 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 SYT17Q9BSW7 474 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 LOC102723532A0A0G2JNH3 316 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 ALPLP05186 524 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 ALDH3B1P43353 468 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 RPS5P46782 204 aaKnown RBP14.02□□□□□ -0.17
CHD4-201ENST00000357008 AKR1C2P52895 323 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 MALLQ13021 153 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 TATDN3Q17R31 274 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 FIGLAQ6QHK4 219 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 ZNF611Q8N823 705 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 OR5L2Q8NGL0 311 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 PRAMEF2O60811 474 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 EIF2DP41214 584 aaKnown RBP14.02□□□□□ -0.17
CHD4-201ENST00000357008 PNPLA1Q8N8W4 532 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 STK35Q8TDR2 534 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 SLC6A5Q9Y345 797 aa14.02□□□□□ -0.17
CHD4-201ENST00000357008 SHDQ96IW2 340 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 OR2M2Q96R28 347 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 PTTG3PQ9NZH4 202 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 LRFN1Q9P244 771 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 ATXN7L1Q9ULK2 861 aaPredicted RBP14.01□□□□□ -0.17
CHD4-201ENST00000357008 C7orf72A4D263 438 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 KLF8O95600 359 aaPredicted RBP14.01□□□□□ -0.17
CHD4-201ENST00000357008 EGFP01133 1207 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 TMEM225BP0DP42 221 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 TPT1P13693 172 aaKnown RBP14.01□□□□□ -0.17
CHD4-201ENST00000357008 SLC2A5P22732 501 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 CD70P32970 193 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 NOVP48745 357 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 METTL4Q8N3J2 472 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 SPIN2AQ99865 258 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 SPIN2BQ9BPZ2 258 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 INPP5EQ9NRR6 644 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 WASH4PA8MWX3 477 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 POLR1CO15160 346 aaPredicted RBP14.01□□□□□ -0.17
CHD4-201ENST00000357008 HNRNPA1P09651 372 aaKnown RBP eCLIP14.01□□□□□ -0.17
CHD4-201ENST00000357008 IL1RNP18510 177 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 CPOXP36551 454 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 PTPRRQ15256 657 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 ZNF619Q8N2I2 560 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 GMLQ99445 158 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 GABRR3A8MPY1 467 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 CERS1P27544 350 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 SGSHP51688 502 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 WDR45BQ5MNZ6 344 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 NADSYN1Q6IA69 706 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 LCTLQ6UWM7 567 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 SGPP2Q8IWX5 399 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 SYNPRQ8TBG9 265 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 GTF2H4Q92759 462 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 ATOH8Q96SQ7 321 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 DDX31Q9H8H2 851 aaKnown RBP14.01□□□□□ -0.17
CHD4-201ENST00000357008 RASD1Q9Y272 281 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 LTN1O94822 1766 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 KNG1P01042 644 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 PNMTP11086 282 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 GIFP27352 417 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 FCRLBQ6BAA4 426 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 PIANPQ8IYJ0 282 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 SERINC2Q96SA4 455 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 ARNT2Q9HBZ2 717 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 KLHL42Q9P2K6 505 aa14.01□□□□□ -0.17
CHD4-201ENST00000357008 LSM5Q9Y4Y9 91 aaKnown RBP14.01□□□□□ -0.17
CHD4-201ENST00000357008 SSX4O60224 188 aa14□□□□□ -0.17
CHD4-201ENST00000357008 CRABP1P29762 137 aa14□□□□□ -0.17
CHD4-201ENST00000357008 BDKRB2P30411 391 aa14□□□□□ -0.17
CHD4-201ENST00000357008 DLX2Q07687 328 aaPredicted RBP14□□□□□ -0.17
CHD4-201ENST00000357008 TMPPEQ6ZT21 453 aa14□□□□□ -0.17
CHD4-201ENST00000357008 SPRED1Q7Z699 444 aa14□□□□□ -0.17
CHD4-201ENST00000357008 ACOT11Q8WXI4 607 aaPredicted RBP14□□□□□ -0.17
CHD4-201ENST00000357008 PRRT1Q99946 306 aa14□□□□□ -0.17
CHD4-201ENST00000357008 C1QTNF2Q9BXJ5 285 aa14□□□□□ -0.17
CHD4-201ENST00000357008 NAA50Q9GZZ1 169 aaKnown RBP14□□□□□ -0.17
CHD4-201ENST00000357008 OR6C2Q9NZP2 312 aa14□□□□□ -0.17
CHD4-201ENST00000357008 M0QZQ0 153 aa14□□□□□ -0.17
CHD4-201ENST00000357008 PPP6CO00743 305 aa14□□□□□ -0.17
CHD4-201ENST00000357008 MEF2DQ14814 521 aa14□□□□□ -0.17
CHD4-201ENST00000357008 RTP2Q5QGT7 225 aa14□□□□□ -0.17
CHD4-201ENST00000357008 DNAJC22Q8N4W6 341 aa14□□□□□ -0.17
CHD4-201ENST00000357008 ESX1Q8N693 406 aa14□□□□□ -0.17
CHD4-201ENST00000357008 OR1J4Q8NGS1 313 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms