RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 BICRALQ6AI39 1079 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 PLEKHM3Q6ZWE6 761 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 CEACAM19Q7Z692 300 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 KIAA0907Q7Z7F0 614 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-203ENST00000356147 FAM129CQ86XR2 697 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 ZNF527Q8NB42 609 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 CYB561A3Q8NBI2 242 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 PLA2G15Q8NCC3 412 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 OR5M3Q8NGP4 307 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 OR8K5Q8NH50 307 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 TIFAQ96CG3 184 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 AMDHD1Q96NU7 426 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 C19orf43Q9BQ61 176 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 GSDMCQ9BYG8 508 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 SPRTNQ9H040 489 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-203ENST00000356147 ELAC1Q9H777 363 aaKnown RBP9.48□□□□□ -0.89
PTPRA-203ENST00000356147 FOLH1BQ9HBA9 442 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 AHSPQ9NZD4 102 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 CBLCQ9ULV8 474 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 SPATA2Q9UM82 520 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 HEATR5BQ9P2D3 2071 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 A0A1W2PRG6 482 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 SNTNA6NMZ2 147 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 KDM4EB2RXH2 506 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-203ENST00000356147 PI15O43692 258 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 GATBO75879 557 aaKnown RBP9.48□□□□□ -0.89
PTPRA-203ENST00000356147 PROS1P07225 676 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 NUDT1P36639 197 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 SUZ12Q15022 739 aaKnown RBP9.48□□□□□ -0.89
PTPRA-203ENST00000356147 TPGS2Q68CL5 300 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 UBE3DQ7Z6J8 389 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 LUZP2Q86TE4 346 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 KRT78Q8N1N4 520 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 IL17RCQ8NAC3 791 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 OR2T35Q8NGX2 323 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 GIMAP1Q8WWP7 306 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 TTC9Q92623 222 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 TMEM175Q9BSA9 504 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 ALG8Q9BVK2 526 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 C1QTNF7Q9BXJ2 289 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 AUNIPQ9H7T9 357 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 ADAM30Q9UKF2 790 aa9.48□□□□□ -0.89
PTPRA-203ENST00000356147 KIF26AQ9ULI4 1882 aaPredicted RBP9.48□□□□□ -0.89
PTPRA-203ENST00000356147 J3QLW9 94 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 SOD2P04179 222 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 THY1P04216 161 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 FCER2P06734 321 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 PTHLHP12272 177 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 ZNF19P17023 458 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 PAICSP22234 425 aaKnown RBP9.47□□□□□ -0.89
PTPRA-203ENST00000356147 MAPK9P45984 424 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 SELENOPP49908 381 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 CAMK1Q14012 370 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 LTB4RQ15722 352 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 C9orf64Q5T6V5 341 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 C18orf63Q68DL7 685 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 FAAP20Q6NZ36 180 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 SFXN4Q6P4A7 337 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 METAP1DQ6UB28 335 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-203ENST00000356147 ZNF793Q6ZN11 406 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 IKBIPQ70UQ0 350 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 TOMM5Q8N4H5 51 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 POGLUT1Q8NBL1 392 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 TFGQ92734 400 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-203ENST00000356147 COL26A1Q96A83 441 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 WDR34Q96EX3 536 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 MS4A7Q9GZW8 240 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-203ENST00000356147 METTL17Q9H7H0 456 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-203ENST00000356147 POLMQ9NP87 494 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-203ENST00000356147 C12orf4Q9NQ89 552 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 CYSLTR2Q9NS75 346 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 SCN5AQ14524 2016 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 CENPVL1A0A0U1RR11 272 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 C4orf51C9J302 202 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 NDUFS4O43181 175 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 EFCAB14O75071 495 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 FZD7O75084 574 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 RGS9O75916 674 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-203ENST00000356147 SYN1P17600 705 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 OMPP47874 163 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 RGS8P57771 180 aaPredicted RBP9.47□□□□□ -0.89
PTPRA-203ENST00000356147 TSPAN31Q12999 210 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 AGERQ15109 404 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 ZMYND11Q15326 602 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 AANATQ16613 207 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 NDUFA9Q16795 377 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 SLC36A2Q495M3 483 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 ZNF697Q5TEC3 545 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 CXXC5Q7LFL8 322 aaKnown RBP9.47□□□□□ -0.89
PTPRA-203ENST00000356147 METTL3Q86U44 580 aaKnown RBP9.47□□□□□ -0.89
PTPRA-203ENST00000356147 OR51L1Q8NGJ5 315 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 GNPDA2Q8TDQ7 276 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 SCMH1Q96GD3 660 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 RBP7Q96R05 134 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 DPH1Q9BZG8 443 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 BTBD1Q9H0C5 482 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 DPAGT1Q9H3H5 408 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 KNL1Q8NG31 2342 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 CACNA1CQ13936 2221 aa9.47□□□□□ -0.89
PTPRA-203ENST00000356147 ARID1BQ8NFD5 2236 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms