RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 GLTPD2A6NH11 291 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 ARPC1BO15143 372 aaKnown RBP12.75□□□□□ -0.37
TRIM4-203ENST00000355947 ACADMP11310 421 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 LGALSLQ3ZCW2 172 aaPredicted RBP12.75□□□□□ -0.37
TRIM4-203ENST00000355947 LIPIQ6XZB0 460 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 FAM129CQ86XR2 697 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 NPAS4Q8IUM7 802 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 ARL14Q8N4G2 192 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 OR2A12Q8NGT7 310 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 TM4SF18Q96CE8 201 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 NXPE2Q96DL1 559 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 KCNN2Q9H2S1 579 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 FBXL4Q9UKA2 621 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 SCN8AQ9UQD0 1980 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 F5P12259 2224 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 TRDV1A0A1B0GX56 115 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 MEIS3P1A6NDR6 274 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 FCMRO60667 390 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 MPC2O95563 127 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 BMP7P18075 431 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 PSMA3P25788 255 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 PSMB10P40306 273 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 PXNP49023 591 aaPredicted RBP12.75□□□□□ -0.37
TRIM4-203ENST00000355947 SELENOPP49908 381 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 OR12D2P58182 307 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 TGM3Q08188 693 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 SFRP5Q5T4F7 317 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRIM4-203ENST00000355947 GAREM2Q75VX8 874 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 ACBD7Q8N6N7 88 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 OR8K3Q8NH51 312 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 ING5Q8WYH8 240 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 C1QTNF7Q9BXJ2 289 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 SEMA4CQ9C0C4 833 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 PRDM9Q9NQV7 894 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 DIABLOQ9NR28 239 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 KLHL28Q9NXS3 571 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 SF3B6Q9Y3B4 125 aaKnown RBP12.75□□□□□ -0.37
TRIM4-203ENST00000355947 VWA8A3KMH1 1905 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 LOC285556D6RIA3 1793 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 FAM171A2A8MVW0 826 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 LEFTY2O00292 366 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 DPM1O60762 260 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 EFCAB14O75071 495 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 RGS9O75916 674 aaPredicted RBP12.74□□□□□ -0.37
TRIM4-203ENST00000355947 ZNF30P17039 623 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 IFNGR2P38484 337 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 LTB4RQ15722 352 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 MINDY4Q4G0A6 757 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 KHDRBS2Q5VWX1 349 aaKnown RBP12.74□□□□□ -0.37
TRIM4-203ENST00000355947 SFXN4Q6P4A7 337 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 KIAA0907Q7Z7F0 614 aaPredicted RBP12.74□□□□□ -0.37
TRIM4-203ENST00000355947 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.74□□□□□ -0.37
TRIM4-203ENST00000355947 TBC1D19Q8N5T2 526 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 DUSP18Q8NEJ0 188 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 TFGQ92734 400 aaPredicted RBP12.74□□□□□ -0.37
TRIM4-203ENST00000355947 NEURL3Q96EH8 262 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 C4orf36Q96KX1 117 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 LINC00052Q96N35 136 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 ZNF559Q9BR84 538 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 TRAF4Q9BUZ4 470 aaPredicted RBP12.74□□□□□ -0.37
TRIM4-203ENST00000355947 SAV1Q9H4B6 383 aaPredicted RBP12.74□□□□□ -0.37
TRIM4-203ENST00000355947 GLIPR2Q9H4G4 154 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 INSL5Q9Y5Q6 135 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 GRM6O15303 877 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 RNF13O43567 381 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 TFP02787 698 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 MC3RP41968 323 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 LY6G5CQ5SRR4 150 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 CST9Q5W186 159 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 TIGD3Q6B0B8 471 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 MS4A15Q8N5U1 240 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 MOSPD2Q8NHP6 518 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 NKX3-1Q99801 234 aaPredicted RBP12.74□□□□□ -0.37
TRIM4-203ENST00000355947 AIF1LQ9BQI0 150 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 ZFP64Q9NPA5 681 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 USP36Q9P275 1121 aaKnown RBP12.74□□□□□ -0.37
TRIM4-203ENST00000355947 TESQ9UGI8 421 aaKnown RBP12.74□□□□□ -0.37
TRIM4-203ENST00000355947 ENTPD4Q9Y227 616 aa12.74□□□□□ -0.37
TRIM4-203ENST00000355947 NRG2O14511 850 aaPredicted RBP12.73□□□□□ -0.37
TRIM4-203ENST00000355947 HOXB3P14651 431 aaPredicted RBP12.73□□□□□ -0.37
TRIM4-203ENST00000355947 TYRP14679 529 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 C17orf107Q6ZR85 190 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 C17orf47Q8NEP4 570 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 OR5W2Q8NH69 310 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 OTUB2Q96DC9 234 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 WDR89Q96FK6 387 aaPredicted RBP12.73□□□□□ -0.37
TRIM4-203ENST00000355947 ERMAPQ96PL5 475 aaPredicted RBP12.73□□□□□ -0.37
TRIM4-203ENST00000355947 HCAR1Q9BXC0 346 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 MCCC2Q9HCC0 563 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 NUP50Q9UKX7 468 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 COPS3Q9UNS2 423 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 DSPPQ9NZW4 1301 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 SLC19A2O60779 497 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 LGI1O95970 557 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 TRHRP34981 398 aaPredicted RBP12.73□□□□□ -0.37
TRIM4-203ENST00000355947 NUP62P37198 522 aaPredicted RBP12.73□□□□□ -0.37
TRIM4-203ENST00000355947 TEKQ02763 1124 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 KCNC3Q14003 757 aa12.73□□□□□ -0.37
TRIM4-203ENST00000355947 PRPF38BQ5VTL8 546 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms