RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 KISS1RQ969F8 398 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 FKBP10Q96AY3 582 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 TM4SF18Q96CE8 201 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 NEURL3Q96EH8 262 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 FAM120BQ96EK7 910 aaKnown RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 MVB12AQ96EY5 273 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 SMIM10Q96HG1 83 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 EGLN2Q96KS0 407 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 LRFN5Q96NI6 719 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 TRAPPC9Q96Q05 1148 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 BTBD9Q96Q07 612 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 F2RL3Q96RI0 385 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF184Q99676 751 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 WDR77Q9BQA1 342 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 C17orf62Q9BQA9 187 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 THUMPD3Q9BV44 507 aaKnown RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 JAM3Q9BX67 310 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 UGT2B28Q9BY64 529 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 CHST8Q9H2A9 424 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 COPS7BQ9H9Q2 264 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 TPT1P8Q9HAU6 139 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 IL1RL2Q9HB29 575 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 FGF21Q9NSA1 209 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 GIMAP4Q9NUV9 329 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 ASH2LQ9UBL3 628 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 RIMS3Q9UJD0 308 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 PSME2Q9UL46 239 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 SAMD4AQ9UPU9 718 aaKnown RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 EXO1Q9UQ84 846 aaKnown RBP6.46□□□□□ -1.38
VPS13A-201ENST00000355766 LRRC42Q9Y546 428 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 AP4S1Q9Y587 144 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 POLEQ07864 2286 aa6.46□□□□□ -1.38
VPS13A-201ENST00000355766 ANKHD1Q8IWZ3 2542 aaKnown RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 IGHV5-51A0A0C4DH38 117 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 A0A1W2PRB8 838 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 FEZF1A0PJY2 475 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 C9JVG2 144 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 CLIC1O00299 241 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 AKAP10O43572 662 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 ASNA1O43681 348 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 B3GALT2O43825 422 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 TMPRSS11DO60235 418 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 LCMT2O60294 686 aaKnown RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 CTSVO60911 334 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 KLHL18O94889 574 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 LRATO95237 230 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 BMP10O95393 424 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 ZBTB11O95625 1053 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 IFNA14P01570 189 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 KLK3P07288 261 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 RAP2AP10114 183 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 NR2F6P10588 404 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 ACADSP16219 412 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 ALOX12P18054 663 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 POLR2CP19387 275 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 ATP6V1B2P21281 511 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 TLX1P31314 330 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 MTPNP58546 118 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 KRTAP10-9P60411 292 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 PPP1CAP62136 330 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 MRPS22P82650 360 aaKnown RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 TNFRSF17Q02223 184 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 C2orf80Q0P641 193 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 BIKQ13323 160 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 FAM53BQ14153 422 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 GNA13Q14344 377 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 NDUFA9Q16795 377 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 CYP51A1Q16850 503 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 PRTGQ2VWP7 1150 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 FAM98BQ52LJ0 330 aaKnown RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 VWA2Q5GFL6 755 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 TOR1AIP1Q5JTV8 583 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 OGFRL1Q5TC84 451 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 FAM219BQ5XKK7 198 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 FCRL6Q6DN72 434 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 LCN10Q6JVE6 187 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 SLC48A1Q6P1K1 146 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 MRGPREQ86SM8 312 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 RAB43Q86YS6 212 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 ADGRG5Q8IZF4 528 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 GALNT16Q8N428 558 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 RNF175Q8N4F7 328 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 KLHL36Q8N4N3 616 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 ZNF808Q8N4W9 903 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 C2orf73Q8N5S3 287 aaPredicted RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 CSNK1A1LQ8N752 337 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 ANKFN1Q8N957 763 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 CLEC1AQ8NC01 280 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 C11orf65Q8NCR3 313 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 OR56A1Q8NGH5 318 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 OR4A15Q8NGL6 344 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 MIPOL1Q8TD10 442 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 GRHL3Q8TE85 626 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 FAR1Q8WVX9 515 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 PYDC1Q8WXC3 89 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 TBC1D20Q96BZ9 403 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 SLX1AQ9BQ83 275 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 RPF2Q9H7B2 306 aaKnown RBP6.45□□□□□ -1.38
VPS13A-201ENST00000355766 SLC35C2Q9NQQ7 365 aa6.45□□□□□ -1.38
VPS13A-201ENST00000355766 SH3BP4Q9P0V3 963 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms