RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 A0A087WUU8 490 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 CENPVL1A0A0U1RR11 272 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 HRKO00198 91 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 NME6O75414 186 aaPredicted RBP15.94■□□□□ 0.14
VPS13B-201ENST00000355155 SEC14L2O76054 403 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 OMPP47874 163 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 EFNA3P52797 238 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 RGS8P57771 180 aaPredicted RBP15.94■□□□□ 0.14
VPS13B-201ENST00000355155 FGD3Q5JSP0 725 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 FAM71CQ8NEG0 241 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 NECAB3Q96P71 396 aaPredicted RBP15.94■□□□□ 0.14
VPS13B-201ENST00000355155 MCHR1Q99705 422 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 SLC26A1Q9H2B4 701 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.94■□□□□ 0.14
VPS13B-201ENST00000355155 FRG2CA6NGY1 282 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 CCNYL3P0C7X3 344 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 CYP4B1P13584 511 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 MMP11P24347 488 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 TAS2R41P59536 307 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 CDK5Q00535 292 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 ZFP36L1Q07352 338 aaKnown RBP15.94■□□□□ 0.14
VPS13B-201ENST00000355155 TSPAN31Q12999 210 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 ZNF267Q14586 743 aaPredicted RBP15.94■□□□□ 0.14
VPS13B-201ENST00000355155 CCNJQ5T5M9 372 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 MRPL2Q5T653 305 aaKnown RBP15.94■□□□□ 0.14
VPS13B-201ENST00000355155 ISLR2Q6UXK2 745 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 KCTD8Q6ZWB6 473 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 MBOAT2Q6ZWT7 520 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 GDF7Q7Z4P5 450 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 LSMEM1Q8N8F7 131 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 OR13F1Q8NGS4 319 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 CNIH3Q8TBE1 160 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 IFI44Q8TCB0 444 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 MUL1Q969V5 352 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 ADIPOR1Q96A54 375 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 SLC41A3Q96GZ6 507 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 PRSS27Q9BQR3 290 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 ZNF559Q9BR84 538 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 HOXD1Q9GZZ0 328 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 SLC22A11Q9NSA0 550 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 ERVK-19Q9WJR5 959 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 DTX4Q9Y2E6 619 aa15.94■□□□□ 0.14
VPS13B-201ENST00000355155 VSTM2BA6NLU5 285 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 ATP12AP54707 1039 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 MVKQ03426 396 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 PLA2G2CQ5R387 149 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 FNDC7Q5VTL7 733 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 RBM44Q6ZP01 1051 aaKnown RBP15.93■□□□□ 0.14
VPS13B-201ENST00000355155 RASSF6Q6ZTQ3 369 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 EID2Q8N6I1 236 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 POGLUT1Q8NBL1 392 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 RCBTB1Q8NDN9 531 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.93■□□□□ 0.14
VPS13B-201ENST00000355155 PTCHD1Q96NR3 888 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 SCN3BQ9NY72 215 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 CBLCQ9ULV8 474 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 TRAPPC13A5PLN9 417 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 OR10H3O60404 316 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 CFIP05156 583 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 ACP1P24666 158 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 FPR3P25089 353 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 DCKP27707 260 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 OR1D4P47884 311 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 PRSS48Q7RTY5 328 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 ZNF441Q8N8Z8 693 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 CCDC74BQ96LY2 380 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 CCNL2Q96S94 520 aaPredicted RBP15.93■□□□□ 0.14
VPS13B-201ENST00000355155 FSCN3Q9NQT6 498 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 DHCR7Q9UBM7 475 aaKnown RBP15.93■□□□□ 0.14
VPS13B-201ENST00000355155 PSORS1C1Q9UIG5 152 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 ZNF223Q9UK11 482 aaPredicted RBP15.93■□□□□ 0.14
VPS13B-201ENST00000355155 TRIOO75962 3097 aa15.93■□□□□ 0.14
VPS13B-201ENST00000355155 C17orf105B2RV13 164 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 IL33O95760 270 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 KRT20P35900 424 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 STAT5AP42229 794 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 GPR68Q15743 365 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 TRIM61Q5EBN2 209 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 ZAR1Q86SH2 424 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 SENP5Q96HI0 755 aaPredicted RBP15.92■□□□□ 0.14
VPS13B-201ENST00000355155 ZNF426Q9BUY5 554 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 DNAJB12Q9NXW2 375 aaKnown RBP15.92■□□□□ 0.14
VPS13B-201ENST00000355155 ATXN7L1Q9ULK2 861 aaPredicted RBP15.92■□□□□ 0.14
VPS13B-201ENST00000355155 MAU2Q9Y6X3 613 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 COMMD3-BMI1R4GMX3 469 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 OR6B1O95007 311 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 PIPP12273 146 aaPredicted RBP15.92■□□□□ 0.14
VPS13B-201ENST00000355155 HTR2AP28223 471 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 SLC15A1P46059 708 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 CDC42P60953 191 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 FLYWCH1Q4VC44 716 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 LINC00114Q6XXX2 140 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 GPR141Q7Z602 305 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 TMEM151BQ8IW70 566 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 BCORP1Q8N888 145 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 GTPBP3Q969Y2 492 aaKnown RBP15.92■□□□□ 0.14
VPS13B-201ENST00000355155 NODALQ96S42 347 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 CNOT2Q9NZN8 540 aaKnown RBP15.92■□□□□ 0.14
VPS13B-201ENST00000355155 FER1L5A0AVI2 2057 aa15.92■□□□□ 0.14
VPS13B-201ENST00000355155 PEX12O00623 359 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms