RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 MUTYHQ9UIF7 546 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 ZC3H12DA2A288 527 aaKnown RBP9.72□□□□□ -0.85
SMPD4-201ENST00000351288 FAM171A2A8MVW0 826 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 CDRT1O95170 752 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 HLA-DQA2P01906 255 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 PROS1P07225 676 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 GNSP15586 552 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 SOX18P35713 384 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 GFERP55789 205 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 IRF3Q14653 427 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 ODF4Q2M2E3 257 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 CRTC2Q53ET0 693 aaPredicted RBP9.72□□□□□ -0.85
SMPD4-201ENST00000351288 OR5M10Q6IEU7 315 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 PTCRAQ6ISU1 281 aaPredicted RBP9.72□□□□□ -0.85
SMPD4-201ENST00000351288 PHOSPHO1Q8TCT1 267 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 EFHD2Q96C19 240 aaPredicted RBP9.72□□□□□ -0.85
SMPD4-201ENST00000351288 NEURL3Q96EH8 262 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 TMED9Q9BVK6 235 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 BARHL1Q9BZE3 327 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 RACGAP1Q9H0H5 632 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 PALMDQ9NP74 551 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 THSD1Q9NS62 852 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 TMEM74BQ9NUR3 256 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 SLC17A4Q9Y2C5 497 aa9.72□□□□□ -0.85
SMPD4-201ENST00000351288 MRPS17Q9Y2R5 130 aaKnown RBP9.72□□□□□ -0.85
SMPD4-201ENST00000351288 A0A1B0GVC2 190 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 A6NIN4 97 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 CCRL2O00421 344 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 NCR1O76036 304 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 MAOAP21397 527 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 AHCYP23526 432 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 MRPS21P82921 87 aaKnown RBP9.71□□□□□ -0.85
SMPD4-201ENST00000351288 SELENBP1Q13228 472 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 SPHARQ15513 63 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 SAXO2Q658L1 398 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 ZNF770Q6IQ21 691 aaPredicted RBP9.71□□□□□ -0.85
SMPD4-201ENST00000351288 MCATQ8IVS2 390 aaKnown RBP9.71□□□□□ -0.85
SMPD4-201ENST00000351288 DENND6BQ8NEG7 585 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 OR7G2Q8NG99 324 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 CAPSLQ8WWF8 208 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 SLC25A36Q96CQ1 311 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 PRTFDC1Q9NRG1 225 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 NFKBIL1Q9UBC1 381 aaPredicted RBP9.71□□□□□ -0.85
SMPD4-201ENST00000351288 MMP17Q9ULZ9 603 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 SLC7A7Q9UM01 511 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 ERVK-19Q9WJR5 959 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 BOLA1Q9Y3E2 137 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 TSC22D4Q9Y3Q8 395 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 SNTNA6NMZ2 147 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 BLOC1S5-TXNDC5H3BN57 136 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 PEX12O00623 359 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 DVL2O14641 736 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 CHST10O43529 356 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 OR2B3O76000 313 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 SLC2A10O95528 541 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 EPPINO95925 133 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 OSMP13725 252 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 FOSL2P15408 326 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 GRPRP30550 384 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 TNFSF8P32971 234 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 ETV5P41161 510 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 ETV1P50549 477 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 ZNF33BQ06732 778 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 ST3GAL3Q11203 375 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 RUNX2Q13950 521 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 FBXO43Q4G163 708 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 GDPD3Q7L5L3 318 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 ELP4Q96EB1 424 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 MMP27Q9H306 513 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 A4GNTQ9UNA3 340 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 B3GNT3Q9Y2A9 372 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 PCDHGB6Q9Y5F9 930 aa9.71□□□□□ -0.85
SMPD4-201ENST00000351288 FREM2Q5SZK8 3169 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 CENPVL1A0A0U1RR11 272 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 A8MVJ9 347 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 FAM25AB3EWG3 89 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 FAM25CB3EWG5 89 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 FAM25GB3EWG6 89 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 PSMD9O00233 223 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 FGF17O60258 216 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 PRG2P13727 222 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 CD38P28907 300 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 C21orf58P58505 322 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 NDUFAF6Q330K2 333 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 ZNF791Q3KP31 576 aaPredicted RBP9.71□□□□□ -0.86
SMPD4-201ENST00000351288 NXNL2Q5VZ03 156 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 RANBP3LQ86VV4 465 aaPredicted RBP9.71□□□□□ -0.86
SMPD4-201ENST00000351288 ATCAYQ86WG3 371 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 TRIM69Q86WT6 500 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 OR4F15Q8NGB8 312 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 SUN3Q8TAQ9 357 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 ATOH1Q92858 354 aaPredicted RBP9.71□□□□□ -0.86
SMPD4-201ENST00000351288 PRRG3Q9BZD7 231 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 MED20Q9H944 212 aa9.71□□□□□ -0.86
SMPD4-201ENST00000351288 DDX28Q9NUL7 540 aaKnown RBP9.71□□□□□ -0.86
SMPD4-201ENST00000351288 MED26O95402 600 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 CTSBP07858 339 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 PSMA1P25786 263 aaKnown RBP9.7□□□□□ -0.86
SMPD4-201ENST00000351288 CSTF2P33240 577 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMPD4-201ENST00000351288 GCGRP47871 477 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms