RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 SLC15A1P46059 708 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 SEPHS1P49903 392 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 LSM3P62310 102 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 CDK5Q00535 292 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 GRM7Q14831 915 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ZNHIT3Q15649 155 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 AMZ1Q400G9 498 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ACSM5Q6NUN0 579 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 SLC35F3Q8IY50 421 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 UBALD2Q8IYN6 164 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PIGXQ8TBF5 258 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TMEM255BQ8WV15 326 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PMM1Q92871 262 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 DGAT2Q96PD7 388 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 LMF2Q9BU23 707 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 FOLH1BQ9HBA9 442 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 H0YIG0 161 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 M0R082 166 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TLX2O43763 284 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PRKYO43930 277 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 SOX30O94993 753 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PTHP01270 115 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ADRA2AP08913 450 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PCYT1AP49585 367 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 SMSP52788 366 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 HSD17B7P56937 341 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 CFHR1Q03591 330 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ZNF267Q14586 743 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 IRF3Q14653 427 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TIGD6Q17RP2 521 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 FLYWCH1Q4VC44 716 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PLAG1Q6DJT9 500 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TSSK4Q6SA08 328 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 BCDIN3DQ7Z5W3 292 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 NRMQ8IXM6 262 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 OR4N2Q8NGD1 307 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TBC1D15Q8TC07 691 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 CDCA4Q9BXL8 241 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 POLDIP3Q9BY77 421 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 DSN1Q9H410 356 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 POLE3Q9NRF9 147 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TAS2R16Q9NYV7 291 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 DTX4Q9Y2E6 619 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 MAU2Q9Y6X3 613 aa13.1□□□□□ -0.31
CDK5RAP1-202ENST00000346416 SLC22A1O15245 554 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ZNF749O43361 778 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 OR2B3O76000 313 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 GIMD1P0DJR0 217 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PIPP12273 146 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 MYF5P13349 255 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 HTR2AP28223 471 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 VBP1P61758 197 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 HSD11B2P80365 405 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 SNAP47Q5SQN1 464 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 MBOAT2Q6ZWT7 520 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ZBTB46Q86UZ6 589 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TOR1AIP2Q8NFQ8 470 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TEX47Q8TBZ9 253 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 VSTM2LQ96N03 204 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 CNPPD1Q9BV87 410 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ERVMER34-1Q9H9K5 563 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 NECTIN3Q9NQS3 549 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 RP1P56715 2156 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TRAPPC13A5PLN9 417 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TMEM150CB9EJG8 249 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 H3BMH7 237 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 DUX1O43812 170 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 GLB1P16278 677 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PTNP21246 168 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 FPR3P25089 353 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 GPR3P46089 330 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 GPR4P46093 362 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ARL4DP49703 201 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ENTPD1P49961 510 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PGDP52209 483 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 OCLNQ16625 522 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 MFSD4BQ5TF39 518 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 SLC27A4Q6P1M0 643 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 RASSF6Q6ZTQ3 369 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 TTLL10Q6ZVT0 673 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PLXDC1Q8IUK5 500 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 CROCCP3Q8IVE0 287 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 FAM26EQ8N5C1 309 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 Q8N9G6 341 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 OR8D4Q8NGM9 314 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 RPL3LQ92901 407 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ARMC7Q9H6L4 198 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 CUTCQ9NTM9 273 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 ERVK-19Q9WJR5 959 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 RPL36Q9Y3U8 105 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 CSNK1G3Q9Y6M4 447 aa13.09□□□□□ -0.31
CDK5RAP1-202ENST00000346416 PIP5K1CO60331 668 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PRAMEF2O60811 474 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 CNOT3O75175 753 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 IGKV1D-16P01601 117 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 IFNA16P05015 189 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ALAS2P22557 587 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 EMP3P54852 163 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 EFNB1P98172 346 aa13.08□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PLAURQ03405 335 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms