RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 SMPD1P17405 629 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 ARNTP27540 789 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 BTG1P62324 171 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 SLC35A2P78381 396 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 CD300CQ08708 224 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 HYAL4Q2M3T9 481 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 PRSS55Q6UWB4 352 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 ZNF679Q8IYX0 411 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 OR5H2Q8NGV7 314 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 SMIM3Q9BZL3 60 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 NME7Q9Y5B8 376 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 CIB4A0PJX0 185 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 MEIS3P2A8K0S8 358 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 RNF13O43567 381 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 BPNT1O95861 308 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 WASP42768 502 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 GZMKP49863 264 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 TNFRSF17Q02223 184 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 TIGD3Q6B0B8 471 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 HBMQ6B0K9 141 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 BRAT1Q6PJG6 821 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 LRFN4Q6PJG9 635 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 NLRC3Q7RTR2 1065 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 GPR135Q8IZ08 494 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 MARC2Q969Z3 335 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 KCTD12Q96CX2 325 aaKnown RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 AMBRA1Q9C0C7 1298 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 RTCAO00442 366 aaKnown RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 GPR37L1O60883 481 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 KNG1P01042 644 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 HLA-AP01891 365 aaKnown RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 GAAP10253 952 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 ATP5A1P25705 553 aaKnown RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 HNF1BP35680 557 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 NDUFA6P56556 154 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 PDZK1IP1Q13113 114 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 BTLAQ7Z6A9 289 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 CNTN4Q8IWV2 1026 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 ZMYND19Q96E35 227 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-202ENST00000345356 F2RL3Q96RI0 385 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 DDOQ99489 341 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 ACPTQ9BZG2 426 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 MCCC2Q9HCC0 563 aa11.45□□□□□ -0.58
COL12A1-202ENST00000345356 ZNF726A6NNF4 738 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 FBXO24O75426 580 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 SNRPBP14678 240 aaKnown RBP11.44□□□□□ -0.58
COL12A1-202ENST00000345356 HTRA4P83105 476 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-202ENST00000345356 AANATQ16613 207 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 BEND4Q6ZU67 534 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 Q6ZVU0 165 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 COMMD6Q7Z4G1 85 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 TPRA1Q86W33 373 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 NRROSQ86YC3 692 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 SLC35F2Q8IXU6 374 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 CMIPQ8IY22 773 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 IGSF8Q969P0 613 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 C4orf36Q96KX1 117 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 HS6ST2Q96MM7 605 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 CPPED1Q9BRF8 314 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-202ENST00000345356 COPS7AQ9UBW8 275 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 TSPAN11A1L157 253 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 C11orf98E9PRG8 122 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 KHNYNO15037 678 aaKnown RBP11.44□□□□□ -0.58
COL12A1-202ENST00000345356 PPP1R3DO95685 299 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 INHAP05111 366 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 ZNF30P17039 623 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 TAS2R31P59538 309 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 TBPL1P62380 186 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 CATSPEREQ5SY80 951 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 OR14A2Q96R54 314 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 DPH1Q9BZG8 443 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 TREX1Q9NSU2 369 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 A0A0B4J2A0 478 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 B4DXG7 233 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 CAP1Q01518 475 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 EXOSC2Q13868 293 aaKnown RBP11.44□□□□□ -0.58
COL12A1-202ENST00000345356 TMUB2Q71RG4 321 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 ZNF550Q7Z398 422 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 TMPRSS9Q7Z410 1059 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 C12orf40Q86WS4 652 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 ATOH8Q96SQ7 321 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 MBOAT4Q96T53 435 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 B4GALT6Q9UBX8 382 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 SHPKQ9UHJ6 478 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 HEBP2Q9Y5Z4 205 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 GAPDHSO14556 408 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-202ENST00000345356 DNAJB6O75190 326 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 TXNDC12O95881 172 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 RD3LP0DJH9 198 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 RBMS2Q15434 407 aaKnown RBP11.44□□□□□ -0.58
COL12A1-202ENST00000345356 H3F3CQ6NXT2 135 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 UNQ6126/PRO20091Q6UXV3 157 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 IL17RDQ8NFM7 739 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 C14orf79Q96F83 325 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 UHRF1Q96T88 793 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-202ENST00000345356 BOCQ9BWV1 1114 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 PCDHGA2Q9Y5H1 932 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 V9GY05 133 aa11.44□□□□□ -0.58
COL12A1-202ENST00000345356 MYH11P35749 1972 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms