RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 A6NCN8 305 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 SNTNA6NMZ2 147 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 CELA2BP08218 269 aaPredicted RBP13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 SDC2P34741 201 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 ATP6V1E1P36543 226 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 ETV6P41212 452 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 MAGEA10P43363 369 aaPredicted RBP13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 TMED10P49755 219 aaKnown RBP13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 DEFA1P59665 94 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 DEFA3P59666 94 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 DECR1Q16698 335 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 RNLSQ5VYX0 342 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 SMARCD3Q6STE5 483 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 ABHD13Q7L211 337 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 OSTF1Q92882 214 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 ZFYVE21Q9BQ24 234 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 DPH1Q9BZG8 443 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 MUTYHQ9UIF7 546 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 CLCA2Q9UQC9 943 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 SLC22A7Q9Y694 548 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 TCRBV21S2A2A0A5A6 115 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 SURF4O15260 269 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 APBB3O95704 486 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 LIMS3P0CW19 117 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 LIMS4P0CW20 117 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 SMIM10L1P0DMW3 83 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 FPR3P25089 353 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 ZNF791Q3KP31 576 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 TMEM184AQ6ZMB5 413 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 ZNF620Q6ZNG0 422 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 MBOAT2Q6ZWT7 520 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 CAMKK1Q8N5S9 505 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 CAMKVQ8NCB2 501 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 PFN4Q8NHR9 129 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 HMGB4Q8WW32 186 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 ZFPM2Q8WW38 1151 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 UFD1Q92890 307 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 SMIM10Q96HG1 83 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 RBCK1Q9BYM8 510 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 PRRG3Q9BZD7 231 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 S1PR5Q9H228 398 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 TIGARQ9NQ88 270 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 URADA6NGE7 173 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 KDM4EB2RXH2 506 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 SOCS6O14544 535 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 LALBAP00709 142 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 MSL3P1P0C860 447 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 GCGRP47871 477 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 ILF3Q12906 894 aaKnown RBP eCLIP13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 TAB1Q15750 504 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 DEFB110Q30KQ9 67 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 PGGHGQ32M88 737 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 ARHGAP11BQ3KRB8 267 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 DCST2Q5T1A1 773 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 ZC3H14Q6PJT7 736 aaKnown RBP13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 UTS2BQ765I0 119 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 ZNF438Q7Z4V0 828 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 COX18Q8N8Q8 333 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 OR13H1Q8NG92 308 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 ITPKCQ96DU7 683 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 TMED9Q9BVK6 235 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 FBRSQ9HAH7 460 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 ABCB9Q9NP78 766 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 FGF20Q9NP95 211 aaPredicted RBP13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 PCOLCE2Q9UKZ9 415 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 CMAHPQ9Y471 501 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 V9GYH0 126 aa13.87□□□□□ -0.19
VIPAS39-202ENST00000343765 DMDP11532 3685 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 ZC3H12DA2A288 527 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 SNX4O95219 450 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 OR5F1O95221 314 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 APOA1P02647 267 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 STAT5AP42229 794 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 SLC1A3P43003 542 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 ZNF136P52737 540 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 PSPHP78330 225 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 SELENBP1Q13228 472 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 SRSF5Q13243 272 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 ZNF628Q5EBL2 1059 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 SLC35F1Q5T1Q4 408 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 MRPL2Q5T653 305 aaKnown RBP13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 MRGPREQ86SM8 312 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 ZNF614Q8N883 585 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 NR4A3Q92570 626 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 SLC25A46Q96AG3 418 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 MED20Q9H944 212 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 TBC1D17Q9HA65 648 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 HRASLS2Q9NWW9 162 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 PTGFRNQ9P2B2 879 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 MSRAQ9UJ68 235 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 PILRAQ9UKJ1 303 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 SCML1Q9UN30 329 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 FANCMQ8IYD8 2048 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 FRYLO94915 3013 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 A8MU76 341 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 H3BQ06 376 aaPredicted RBP13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 SLC30A4O14863 429 aa13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 HOXC4P09017 264 aaPredicted RBP13.86□□□□□ -0.19
VIPAS39-202ENST00000343765 HTR2AP28223 471 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms