RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 PLEKHA1Q9HB21 404 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TMEM161AQ9NX61 479 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TAS2R5Q9NYW4 299 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 ABRACLQ9P1F3 81 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 AFF4Q9UHB7 1163 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 AKT3Q9Y243 479 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 RUVBL1Q9Y265 456 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 DENND4AQ7Z401 1863 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TMEM218A2RU14 115 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 GSAPA4D1B5 854 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 LOC730098B7Z3J9 87 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 CLDN5O00501 218 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 PRRG1O14668 218 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SCAMP2O15127 329 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 PGRMC2O15173 223 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TAPBPO15533 448 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 OR10H3O60404 316 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 LILRB5O75023 590 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 NCR1O76036 304 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 LRATO95237 230 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SYPP08247 313 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 LAG3P18627 525 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SLC1A3P43003 542 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 CRATP43155 626 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 MTNR1AP48039 350 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 MECP2P51608 486 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 CCR6P51684 374 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 WNT3P56703 355 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 MRPS10P82664 201 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TNFRSF17Q02223 184 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SLC10A7Q0GE19 358 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 ATP13A5Q4VNC0 1218 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 LBHQ53QV2 105 aaPredicted RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 RTP2Q5QGT7 225 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 PRAMEF19Q5SWL8 479 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TAPT1Q6NXT6 567 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SFXN4Q6P4A7 337 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 CERS6Q6ZMG9 384 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 PAQR9Q6ZVX9 377 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 MOB3CQ70IA8 216 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SLC9B2Q86UD5 537 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 LDLRAD3Q86YD5 345 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 PUSL1Q8N0Z8 303 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TMEM86AQ8N2M4 240 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF565Q8N9K5 539 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 GPR156Q8NFN8 814 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 BEST4Q8NFU0 473 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TRMT10AQ8TBZ6 339 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SMIM4Q8WVI0 70 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 GTF3AQ92664 365 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 CPNE4Q96A23 557 aaPredicted RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF668Q96K58 619 aaPredicted RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SEMA3CQ99985 751 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 GINS4Q9BRT9 223 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 EDEM2Q9BV94 578 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 REPIN1Q9BWE0 567 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF576Q9H609 170 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SARS2Q9NP81 518 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TMEM248Q9NWD8 314 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SPATA6Q9NWH7 488 aaPredicted RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 TVP23BQ9NYZ1 205 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 PIPOXQ9P0Z9 390 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 PTGFRNQ9P2B2 879 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 METTL1Q9UBP6 276 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF69Q9UC07 566 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 ADAMTS5Q9UNA0 930 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 CAMK2AQ9UQM7 478 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 FNDC3AQ9Y2H6 1198 aaKnown RBP7.64□□□□□ -1.19
ATG4A-201ENST00000343524 SLC22A7Q9Y694 548 aa7.64□□□□□ -1.19
ATG4A-201ENST00000343524 NUP205Q92621 2012 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 LOC390937A0A1W2PQ73 354 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 TRBC2A0A5B9 178 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 OR14I1A6ND48 311 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 TTLL8A6PVC2 850 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 EFCAB7A8K855 629 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 CHURC1-FNTBB4DL54 471 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 RNASET2O00584 256 aaKnown RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 LRRTM2O43300 516 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF749O43361 778 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 WIPF1O43516 503 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 TLX2O43763 284 aaPredicted RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 TMEM127O75204 238 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 GUCA1CO95843 209 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 TRBC1P01850 177 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 HPXP02790 462 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 OPN1SWP03999 348 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 URODP06132 367 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 ANXA5P08758 320 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 CBSLP0DN79 551 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 TFPIP10646 304 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 POU3F2P20265 443 aaPredicted RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 LPOP22079 712 aaPredicted RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 EDNRBP24530 442 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 TACR1P25103 407 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 MC4RP32245 332 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 CBSP35520 551 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 ATP5C1P36542 298 aaKnown RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 RPL3P39023 403 aaKnown RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 PTGFRP43088 359 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 OR1E2P47887 323 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms