RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 NPIPA7E9PJI5 369 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 CLDN4O14493 209 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 CTNSO60931 367 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 CNOT3O75175 753 aaKnown RBP17.29■□□□□ 0.36
HOXA9-201ENST00000343483 COQ9O75208 318 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 NPIPA8P0DM63 369 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 RFX3P48380 749 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 RAB15P59190 212 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 BTG2P78543 158 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 DUSP8Q13202 625 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 ATP1A4Q13733 1029 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 TRAM2Q15035 370 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 MAPK14Q16539 360 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 RGS21Q2M5E4 152 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 SNAP47Q5SQN1 464 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 GARNL3Q5VVW2 1013 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 BTLAQ7Z6A9 289 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 MEX3DQ86XN8 651 aaKnown RBP17.29■□□□□ 0.36
HOXA9-201ENST00000343483 SLC35F3Q8IY50 421 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 ZNF595Q8IYB9 648 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 CENPSQ8N2Z9 138 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 OR6Q1Q8NGQ2 317 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 NR4A3Q92570 626 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 DIO2Q92813 273 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 IL4I1Q96RQ9 567 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 MCHR1Q99705 422 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 RAB33BQ9H082 229 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 DCSTAMPQ9H295 470 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 ZBTB20Q9HC78 741 aaPredicted RBP17.29■□□□□ 0.36
HOXA9-201ENST00000343483 TAS2R16Q9NYV7 291 aa17.29■□□□□ 0.36
HOXA9-201ENST00000343483 CNOT2Q9NZN8 540 aaKnown RBP17.29■□□□□ 0.36
HOXA9-201ENST00000343483 FRYLO94915 3013 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 A0A087WUU8 490 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 IGHV1OR21-1A0A087WYE8 117 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 GXYLT2A0PJZ3 443 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 PEX12O00623 359 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 HRO43593 1189 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 NUDT21O43809 227 aaKnown RBP17.28■□□□□ 0.36
HOXA9-201ENST00000343483 NTN1O95631 604 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 MAOAP21397 527 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 ARL4DP49703 201 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 POU6F2P78424 691 aaPredicted RBP17.28■□□□□ 0.36
HOXA9-201ENST00000343483 ST3GAL3Q11203 375 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 MAP4K2Q12851 820 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 EIPR1Q53HC9 387 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 ARMCX4Q5H9R4 360 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 SLX4IPQ5VYV7 408 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 ZC3H14Q6PJT7 736 aaKnown RBP17.28■□□□□ 0.36
HOXA9-201ENST00000343483 ZNF730Q6ZMV8 503 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 C9orf43Q8TAL5 461 aaPredicted RBP17.28■□□□□ 0.36
HOXA9-201ENST00000343483 CD180Q99467 661 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 GPA33Q99795 319 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 SLIRPQ9GZT3 109 aaKnown RBP17.28■□□□□ 0.36
HOXA9-201ENST00000343483 ARMC7Q9H6L4 198 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 FBXO8Q9NRD0 319 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 TMEM184BQ9Y519 407 aaPredicted RBP17.28■□□□□ 0.36
HOXA9-201ENST00000343483 MAU2Q9Y6X3 613 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 SULT1C4O75897 302 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 THBS1P07996 1170 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 IFI6P09912 130 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 OCM2P0CE71 109 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 OCMP0CE72 109 aaPredicted RBP17.28■□□□□ 0.36
HOXA9-201ENST00000343483 HSMCR30P0CW71 290 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 EEF1A1P68104 462 aaKnown RBP17.28■□□□□ 0.36
HOXA9-201ENST00000343483 GRM7Q14831 915 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 C1orf94Q6P1W5 598 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 ZNF367Q7RTV3 350 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 BMP8AQ7Z5Y6 402 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 ADAMTS18Q8TE60 1221 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 CHPT1Q8WUD6 406 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 DGAT2Q96PD7 388 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 CDCA4Q9BXL8 241 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 WDR87Q6ZQQ6 2873 aa17.28■□□□□ 0.36
HOXA9-201ENST00000343483 SDK1Q7Z5N4 2213 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 KMT2EQ8IZD2 1858 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 HRKO00198 91 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 DUX1O43812 170 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 KIAA0513O60268 411 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 CBFA2T3O75081 653 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 ENTPD6O75354 484 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 RPLP0P05388 317 aaKnown RBP17.27■□□□□ 0.36
HOXA9-201ENST00000343483 DBIP07108 87 aaKnown RBP17.27■□□□□ 0.36
HOXA9-201ENST00000343483 SSTR4P31391 388 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 UGT2B10P36537 528 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 MAP3K8P41279 467 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 SNRPGP62308 76 aaKnown RBP17.27■□□□□ 0.36
HOXA9-201ENST00000343483 TUBA1BP68363 451 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 COX10Q12887 443 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 CASP12Q6UXS9 341 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 TUBA1AQ71U36 451 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 RRM2BQ7LG56 351 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 IQCF1Q8N6M8 205 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 OR51Q1Q8NH59 317 aa17.27■□□□□ 0.36
HOXA9-201ENST00000343483 SNRNP27Q8WVK2 155 aaKnown RBP17.27■□□□□ 0.36
HOXA9-201ENST00000343483 BLACEA4D250 179 aa17.27■□□□□ 0.35
HOXA9-201ENST00000343483 TMEM150CB9EJG8 249 aa17.27■□□□□ 0.35
HOXA9-201ENST00000343483 OR2B3O76000 313 aa17.27■□□□□ 0.35
HOXA9-201ENST00000343483 AK1P00568 194 aa17.27■□□□□ 0.35
HOXA9-201ENST00000343483 TP53P04637 393 aaPredicted RBP17.27■□□□□ 0.35
HOXA9-201ENST00000343483 ADRA2AP08913 450 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms