RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 BPIFA1Q9NP55 256 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 FBXO8Q9NRD0 319 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 IL37Q9NZH6 218 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 KCNIP1Q9NZI2 227 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 CNTN3Q9P232 1028 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 CLCF1Q9UBD9 225 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 FAM170BA6NMN3 283 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 FSCN2O14926 492 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 SLC31A2O15432 143 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ZNF623O75123 536 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 IRF9Q00978 393 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 AMZ1Q400G9 498 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 TEX44Q53QW1 395 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 BPHLQ86WA6 291 aaPredicted RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 IL17RDQ8NFM7 739 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 GNPDA2Q8TDQ7 276 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 APH1BQ8WW43 257 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 METTL21AQ8WXB1 218 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 GPR21Q99679 349 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 OR51I2Q9H344 312 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 UBQLN3Q9H347 655 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 TAF9BQ9HBM6 251 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 GPRC5CQ9NQ84 441 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 SLC35D1Q9NTN3 355 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 FBXW2Q9UKT8 454 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 INTS6Q9UL03 887 aaKnown RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 GOLT1BQ9Y3E0 138 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 STRCQ7RTU9 1775 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 MYO18BQ8IUG5 2567 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 TULP4Q9NRJ4 1543 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 LOC102723971A0A1B0GUV8 181 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 H0YGN5 161 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 DVL2O14641 736 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 AQP9O43315 295 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 FOXD2O60548 495 aaPredicted RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 LYPLA2O95372 231 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 SERPINE2P07093 398 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ZBTB37Q5TC79 503 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ZPBP2Q6X784 338 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 PRR22Q8IZ63 422 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 TEX26Q8N6G2 289 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 DCBLD1Q8N8Z6 715 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 DBF4BQ8NFT6 615 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 OR13F1Q8NGS4 319 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 OR51Q1Q8NH59 317 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 SYNPRQ8TBG9 265 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 MUL1Q969V5 352 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 SORCS2Q96PQ0 1159 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 LHX5Q9H2C1 402 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 TMEM82A0PJX8 343 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 GRXCR2A6NFK2 248 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 H7BYZ3 331 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 FBXO24O75426 580 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 AMD1P17707 334 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 GPR50Q13585 617 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 RIN1Q13671 783 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 GRM2Q14416 872 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 PRR27Q6MZM9 219 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 VWA1Q6PCB0 445 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 TOMM20LQ6UXN7 152 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 SLC35D2Q76EJ3 337 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 EXOSC3Q9NQT5 275 aaKnown RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 UBQLN4Q9NRR5 601 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 KLK14Q9P0G3 267 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 SCML1Q9UN30 329 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ALKQ9UM73 1620 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ADGRB3O60242 1522 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 UNC119BA6NIH7 251 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 GJE1A6NN92 205 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 AKR1A1P14550 325 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 PRDX5P30044 214 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 SHMT1P34896 483 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 IRF5Q13568 498 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 PPA1Q15181 289 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 KDELC1Q6UW63 502 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 EID2Q8N6I1 236 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ABHD5Q8WTS1 349 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 THAP4Q8WY91 577 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 HERVK_113Q902F9 699 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 LMLNQ96KR4 655 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 NMNAT2Q9BZQ4 307 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 SIAEQ9HAT2 523 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ZNF331Q9NQX6 463 aaPredicted RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 MRPL15Q9P015 296 aaKnown RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 MYEF2Q9P2K5 600 aaKnown RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 RNF150Q9ULK6 438 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 CLEC4EQ9ULY5 219 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 TEX50A0A1B0GTY4 177 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 K7EQM0 130 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 PCCBP05166 539 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 MRPL3P09001 348 aaKnown RBP5.86□□□□□ -1.47
VCAN-203ENST00000343200 GCAP28676 217 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 LIMK1P53667 647 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 TCTE1Q5JU00 501 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 AFMIDQ63HM1 303 aa5.86□□□□□ -1.47
VCAN-203ENST00000343200 ACDQ96AP0 544 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms