RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 GRIP1Q9Y3R0 1128 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 CTSLP07711 333 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 MAGEA8P43361 318 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 PPP2CBP62714 309 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 PPP2CAP67775 309 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 ABCA11PQ4W5N1 156 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 HSD17B12Q53GQ0 312 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 CD300LGQ6UXG3 332 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 CCDC54Q8NEL0 328 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 MSLNLQ96KJ4 702 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 SLC6A14Q9UN76 642 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 FZD6O60353 706 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 PABPC4LP0CB38 370 aaKnown RBP18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 ARAFP10398 606 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 ZNF12P17014 697 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 GRPRP30550 384 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 HLCSP50747 726 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 PIP5KL1Q5T9C9 394 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 UNQ6126/PRO20091Q6UXV3 157 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 SLITRK4Q8IW52 837 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 ARMC10Q8N2F6 343 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 KIAA1958Q8N8K9 716 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 WDR20Q8TBZ3 569 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 TMEM41AQ96HV5 264 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 DHDHQ9UQ10 334 aa18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 ZNF443Q9Y2A4 671 aaPredicted RBP18.39■□□□□ 0.53
SEMA6C-201ENST00000341697 GFYI3L273 518 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 DENRO43583 198 aaKnown RBP18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 GALK2Q01415 458 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 ABHD17CQ6PCB6 329 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 ASB18Q6ZVZ8 466 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 ZNF420Q8TAQ5 688 aaPredicted RBP18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 TM9SF4Q92544 642 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 PCDH10Q9P2E7 1040 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 HMX2A2RU54 273 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 CDC14CA4D256 554 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 RIN1Q13671 783 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 ASTLQ6HA08 431 aaPredicted RBP18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 IQCF1Q8N6M8 205 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 NEIL3Q8TAT5 605 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 SLAMF8Q9P0V8 285 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 ATXN7L1Q9ULK2 861 aaPredicted RBP18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 POLR2AP24928 1970 aaKnown RBP18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 GABARAPL2P60520 117 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 SF3B4Q15427 424 aaKnown RBP eCLIP18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 SLC18B1Q6NT16 456 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 HMBOX1Q6NT76 420 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 LTB4R2Q9NPC1 389 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 GPR52Q9Y2T5 361 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 TRBV2A0A0J9YWF9 115 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 A0A1W2PPC4 97 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 SLC1A7O00341 560 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 C18orf63Q68DL7 685 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 NLGN4YQ8NFZ3 816 aaPredicted RBP18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 TM4SF18Q96CE8 201 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 TUBA1CQ9BQE3 449 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 VN1R3Q9BXE9 311 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 NT5DC2Q9H857 520 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 C2orf42Q9NWW7 574 aa18.38■□□□□ 0.53
SEMA6C-201ENST00000341697 SLC5A2P31639 672 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 KCNJ10P78508 379 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 UTS2BQ765I0 119 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 VRK2Q86Y07 508 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 TRUB1Q8WWH5 349 aaKnown RBP18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 C19orf43Q9BQ61 176 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 CPPED1Q9BRF8 314 aaPredicted RBP18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 TAS2R10Q9NYW0 307 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 ACAD8Q9UKU7 415 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 GATAD2BQ8WXI9 593 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 SLC22A4Q9H015 551 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 SLC7A11Q9UPY5 501 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 SULT2B1O00204 365 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 CSN2P05814 226 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 PSKH1P11801 424 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 ACVR1BP36896 505 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 MAD2L1BPQ15013 274 aaPredicted RBP18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 CEACAM19Q7Z692 300 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 KLBQ86Z14 1044 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 ACOT11Q8WXI4 607 aaPredicted RBP18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 MMACHCQ9Y4U1 282 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 MYF6P23409 242 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 GGT2P36268 569 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 UBE2NP61088 152 aaKnown RBP18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 HOXC5Q00444 222 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 MAP4K2Q12851 820 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 SNX29P2Q8IUI4 249 aa18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 USP36Q9P275 1121 aaKnown RBP18.37■□□□□ 0.53
SEMA6C-201ENST00000341697 PRAMEF33A0A0G2JMD5 474 aa18.36■□□□□ 0.53
SEMA6C-201ENST00000341697 FBP2O00757 339 aa18.36■□□□□ 0.53
SEMA6C-201ENST00000341697 PRAMEF10O60809 474 aa18.36■□□□□ 0.53
SEMA6C-201ENST00000341697 OLFM2O95897 454 aa18.36■□□□□ 0.53
SEMA6C-201ENST00000341697 AGBL4Q5VU57 503 aa18.36■□□□□ 0.53
SEMA6C-201ENST00000341697 ZNF782Q6ZMW2 699 aaPredicted RBP18.36■□□□□ 0.53
SEMA6C-201ENST00000341697 GALNT15Q8N3T1 639 aa18.36■□□□□ 0.53
SEMA6C-201ENST00000341697 CHTF18Q8WVB6 975 aa18.36■□□□□ 0.53
SEMA6C-201ENST00000341697 GPR78Q96P69 363 aa18.36■□□□□ 0.53
SEMA6C-201ENST00000341697 SMIM30A4D0T7 59 aa18.36■□□□□ 0.53
SEMA6C-201ENST00000341697 A6NIZ1 184 aa18.36■□□□□ 0.53
SEMA6C-201ENST00000341697 TARM1B6A8C7 271 aa18.36■□□□□ 0.53
SEMA6C-201ENST00000341697 CLPXO76031 633 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms