RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 C17orf67Q0P5P2 114 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 GANABQ14697 944 aaKnown RBP17.48■□□□□ 0.39
SYNE4-202ENST00000340477 EIPR1Q53HC9 387 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 WIPI1Q5MNZ9 446 aaPredicted RBP17.48■□□□□ 0.39
SYNE4-202ENST00000340477 CCNJQ5T5M9 372 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 OR5M10Q6IEU7 315 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 MSANTD1Q6ZTZ1 278 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 C16orf62Q7Z3J2 963 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 YRDCQ86U90 279 aaKnown RBP17.48■□□□□ 0.39
SYNE4-202ENST00000340477 MISPQ8IVT2 679 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 PM20D2Q8IYS1 436 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 ZNF808Q8N4W9 903 aaPredicted RBP17.48■□□□□ 0.39
SYNE4-202ENST00000340477 FAM110BQ8TC76 370 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 PSMG3-AS1Q96PY0 264 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 OR2B2Q9GZK3 357 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 ALKBH4Q9NXW9 302 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 TAS2R10Q9NYW0 307 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 COQ3Q9NZJ6 369 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 FLRT3Q9NZU0 649 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 USP9YO00507 2555 aaPredicted RBP17.48■□□□□ 0.39
SYNE4-202ENST00000340477 A1L4Q6 167 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 FAM234BA2RU67 622 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 FAM47E-STBD1D6RA91 191 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 H3BNH8 94 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 RFXANKO14593 260 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 NDUFB5O43674 189 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 EDF1O60869 148 aaKnown RBP17.47■□□□□ 0.39
SYNE4-202ENST00000340477 ANP32DO95626 131 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 OXSR1O95747 527 aaPredicted RBP17.47■□□□□ 0.39
SYNE4-202ENST00000340477 ANGPTL1O95841 491 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 ACTL6AO96019 429 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 RNF224P0DH78 156 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 ENDOUP21128 410 aaKnown RBP17.47■□□□□ 0.39
SYNE4-202ENST00000340477 DPP4P27487 766 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 IL12AP29459 219 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 PTGER4P35408 488 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 GAS1P54826 345 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 DSCR4P56555 118 aaPredicted RBP17.47■□□□□ 0.39
SYNE4-202ENST00000340477 PHC1P78364 1004 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 TXNL4AP83876 142 aaKnown RBP17.47■□□□□ 0.39
SYNE4-202ENST00000340477 HPCAP84074 193 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 FLYWCH1Q4VC44 716 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 TIGD2Q4W5G0 525 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 AAGABQ6PD74 315 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 XKRXQ6PP77 449 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 ZNF621Q6ZSS3 439 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 MAMDC2Q7Z304 686 aaPredicted RBP17.47■□□□□ 0.39
SYNE4-202ENST00000340477 MRGPRGQ86SM5 289 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 MARCH3Q86UD3 253 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 OR5D16Q8NGK9 328 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 GOT1L1Q8NHS2 421 aaPredicted RBP17.47■□□□□ 0.39
SYNE4-202ENST00000340477 STON2Q8WXE9 905 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 NEURL3Q96EH8 262 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 EBF4Q9BQW3 602 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 TNFRSF10DQ9UBN6 386 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 FBXL2Q9UKC9 423 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 TRIM33Q9UPN9 1127 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 SLC6A5Q9Y345 797 aa17.47■□□□□ 0.39
SYNE4-202ENST00000340477 ASH1LQ9NR48 2969 aaKnown RBP17.47■□□□□ 0.39
SYNE4-202ENST00000340477 HECTD1Q9ULT8 2610 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 CCDC154A6NI56 674 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 ALG1L2C9J202 215 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 TROVE2P10155 538 aaKnown RBP eCLIP17.46■□□□□ 0.39
SYNE4-202ENST00000340477 NHSL2Q5HYW2 709 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 C1orf185Q5T7R7 199 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 SAXO2Q658L1 398 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 ENPP6Q6UWR7 440 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 B3GNT6Q6ZMB0 384 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 CLEC4FQ8N1N0 589 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 MIPOL1Q8TD10 442 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 DUSP19Q8WTR2 217 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 ABTB1Q969K4 478 aaPredicted RBP17.46■□□□□ 0.39
SYNE4-202ENST00000340477 ITCHQ96J02 903 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 SFXN2Q96NB2 322 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 OR51I1Q9H343 314 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 DSN1Q9H410 356 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 RABEP2Q9H5N1 569 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 NPHS2Q9NP85 383 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 PLEKHB1Q9UF11 243 aaPredicted RBP17.46■□□□□ 0.39
SYNE4-202ENST00000340477 CAMK2AQ9UQM7 478 aa17.46■□□□□ 0.39
SYNE4-202ENST00000340477 MRPS18CQ9Y3D5 142 aaKnown RBP17.46■□□□□ 0.39
SYNE4-202ENST00000340477 FLNBO75369 2602 aaKnown RBP17.46■□□□□ 0.39
SYNE4-202ENST00000340477 KRT75O95678 551 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 GP1BBP13224 206 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 HK1P19367 917 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 AGAP20933 346 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 DCTP40126 519 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 MRPL19P49406 292 aaKnown RBP17.45■□□□□ 0.38
SYNE4-202ENST00000340477 CRYZQ08257 329 aaKnown RBP17.45■□□□□ 0.38
SYNE4-202ENST00000340477 SQLEQ14534 574 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 C6orf10Q5SRN2 563 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 TNFAIP8L2Q6P589 184 aaPredicted RBP17.45■□□□□ 0.38
SYNE4-202ENST00000340477 DNAJC14Q6Y2X3 702 aaPredicted RBP17.45■□□□□ 0.38
SYNE4-202ENST00000340477 FADS6Q8N9I5 356 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 OR2M3Q8NG83 312 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 OR9I1Q8NGQ6 314 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 RND1Q92730 232 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 DMRTA2Q96SC8 542 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 UGT2B28Q9BY64 529 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 MED11Q9P086 117 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms