RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CPSF4O95639 269 aaKnown RBP9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 PTHLHP12272 177 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 INSRRP14616 1297 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 IDSP22304 550 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 ADH7P40394 386 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 CD86P42081 329 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 ASMTP46597 345 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 AP3S2P59780 193 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 PPIAP62937 165 aaKnown RBP9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 TMEM201Q5SNT2 666 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 MZT2AQ6P582 158 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 BAIAP2L2Q6UXY1 529 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 MEX3DQ86XN8 651 aaKnown RBP9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 PTOV1Q86YD1 416 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 CPXCR1Q8N123 301 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 PRSS35Q8N3Z0 413 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 CPEB3Q8NE35 698 aaKnown RBP9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 SVIPQ8NHG7 77 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 GPR148Q8TDV2 347 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 VOPP1Q96AW1 172 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 LRIG1Q96JA1 1093 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 METTL9Q9H1A3 318 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 KLHL31Q9H511 634 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 NOX3Q9HBY0 568 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 SLC25A19Q9HC21 320 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 GDE1Q9NZC3 331 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 PRAMEF25A6NGN4 478 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 E7EQ34 232 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 GABRPO00591 440 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 GOSR2O14653 212 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 WISP3O95389 354 aaPredicted RBP9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 ADH1AP07327 375 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 OR12D1P0DN82 309 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 ABOP16442 354 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 TACR1P25103 407 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 MPGP29372 298 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 CRATP43155 626 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 TPI1P60174 286 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 PRKCZQ05513 592 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 ABHD18Q0P651 414 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 SLBPQ14493 270 aaKnown RBP eCLIP9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 MPPED2Q15777 294 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 OCLNQ16625 522 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 KIAA0930Q6ICG6 404 aaPredicted RBP9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 PGBD2Q6P3X8 592 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 SPNS3Q6ZMD2 512 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 ZNF621Q6ZSS3 439 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 RTL3Q8N8U3 475 aaKnown RBP9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 PROKR2Q8NFJ6 384 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 ACER1Q8TDN7 264 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 RNFT2Q96EX2 444 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 COPS8Q99627 209 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 C20orf24Q9BUV8 137 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 NFKBIZQ9BYH8 718 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 BCO2Q9BYV7 579 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 FBXO44Q9H4M3 255 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 NPDC1Q9NQX5 325 aaPredicted RBP9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 FTSJ1Q9UET6 329 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 MOKQ9UQ07 419 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 USP34Q70CQ2 3546 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 CCDC85CA6NKD9 419 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 M0QYT0 321 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 AP4M1O00189 453 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 RFXANKO14593 260 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 B4GALT5O43286 388 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 TLX2O43763 284 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 KCNK5O95279 499 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 PRAMEF12O95522 483 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 GIPP09681 153 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 THEGLP0DJG4 465 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 DPEP1P16444 411 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 CAP2P40123 477 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 ADCYAP1R1P41586 468 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 ZNF140P52738 457 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 EPHA4P54764 986 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 INSM1Q01101 510 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 MAD2L1Q13257 205 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 SGCGQ13326 291 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 TMEM132DQ14C87 1099 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 ELAVL1Q15717 326 aaKnown RBP9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 LRRC37A5PQ49AS3 106 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 CBLL1Q75N03 491 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 SYT9Q86SS6 491 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 TMPRSS11BQ86T26 416 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 SKA3Q8IX90 412 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 OR4D9Q8NGE8 314 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 OR56A4Q8NGH8 313 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 OR5M3Q8NGP4 307 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 CD99L2Q8TCZ2 262 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 PHYHIPQ92561 330 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 RAB3CQ96E17 227 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 ZNF471Q9BX82 626 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 PIGVQ9NUD9 493 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 TVP23BQ9NYZ1 205 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 HEPACAM2A8MVW5 462 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 TOX3O15405 576 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 HOXA2O43364 376 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 DGAT1O75907 488 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 CRISP1P54107 249 aa9.05□□□□□ -0.96
PTCHD4-201ENST00000339488 MAXP61244 160 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms