RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 AK9Q5TCS8 1911 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ARHGEF28Q8N1W1 1705 aaKnown RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 TRBV23OR9-2A0A075B6M9 112 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 SLC5A10A0PJK1 596 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF821O75541 412 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 FGBP02675 491 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 VASPP50552 380 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 NAAAQ02083 359 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF543Q08ER8 600 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 SCGB2A2Q13296 93 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 RCAN2Q14206 197 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 NKX1-1Q15270 411 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 PLAC9Q5JTB6 97 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 C9orf135Q5VTT2 229 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ATRAIDQ6UW56 229 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 DRAM2Q6UX65 266 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 DTWD1Q8N5C7 304 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 DBF4BQ8NFT6 615 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 C1GALT1C1Q96EU7 318 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 CMTM7Q96FZ5 175 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 TECTBQ96PL2 329 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 CPPED1Q9BRF8 314 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ZCCHC4Q9H5U6 513 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 POPDC3Q9HBV1 291 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 CAPN10Q9HC96 672 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 RPS10P5Q9NQ39 176 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 PCDHGA6Q9Y5G7 932 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 XRN1Q8IZH2 1706 aaKnown RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 A0A087WUJ7 227 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 A0A087WZY1 265 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 TMEM269A0A1B0GVZ9 245 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 OR2M5A3KFT3 312 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 OR5H15A6NDH6 313 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 OR5H1A6NKK0 313 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 FZD9O00144 591 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 TNFRSF11BO00300 401 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 CTDSPLO15194 276 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 SMPD2O60906 423 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 SCAF4O95104 1147 aaKnown RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 NFATC1O95644 943 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ITGA5P08648 1049 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 SDC1P18827 310 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 DAOAP59103 153 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 TAS2R19P59542 299 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 SNRPGP62308 76 aaKnown RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 PPM1JQ5JR12 505 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 GLT8D1Q68CQ7 371 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 TRMT10BQ6PF06 316 aaKnown RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 TSSK4Q6SA08 328 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ASB18Q6ZVZ8 466 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 GRASPQ7Z6J2 395 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 CMC1Q7Z7K0 106 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 VRK2Q86Y07 508 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 CCDC117Q8IWD4 279 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 DMRTC2Q8IXT2 367 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 OR11H4Q8NGC9 324 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 OR2L2Q8NH16 312 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 PCNPQ8WW12 178 aaKnown RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 EXTL1Q92935 676 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 MARS2Q96GW9 593 aaKnown RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 RHOVQ96L33 236 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 SLC25A19Q9HC21 320 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 TLR8Q9NR97 1041 aaKnown RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ZMYM5Q9UJ78 669 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 DKKL1Q9UK85 242 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 TIAM2Q8IVF5 1701 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 DPYSL4O14531 572 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 FBXO24O75426 580 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 NXPH2O95156 264 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 RAB36O95755 333 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 CFDP00746 253 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 PTHP01270 115 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 FBLN1P23142 703 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 CPT2P23786 658 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 MGAT1P26572 445 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 IDH2P48735 452 aaKnown RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 H3F3AP84243 136 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 FPGSQ05932 587 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 TPBGQ13641 420 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 SNRNP35Q16560 246 aaKnown RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF468Q5VIY5 522 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ENPP7Q6UWV6 458 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 QSOX2Q6ZRP7 698 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 PLD6Q8N2A8 252 aaKnown RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 TMEM161BQ8NDZ6 487 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 OR10D4PQ8NGN7 298 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 OR1J2Q8NGS2 313 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF514Q96K75 400 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ADAD1Q96M93 576 aaKnown RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ZDHHC15Q96MV8 337 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF48Q96MX3 618 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 CITED2Q99967 270 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 SLC35A5Q9BS91 424 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 SMOC1Q9H4F8 434 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 SMDT1Q9H4I9 107 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 AKTIPQ9H8T0 292 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 IL17RBQ9NRM6 502 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 TXNL4BQ9NX01 149 aaKnown RBP3.91□□□□□ -1.78
NEDD4-201ENST00000338963 ARRDC5A6NEK1 342 aa3.91□□□□□ -1.78
NEDD4-201ENST00000338963 A8MT66 165 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms