RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 PARS2Q7L3T8 475 aaKnown RBP12.96□□□□□ -0.33
RTN4-202ENST00000337526 SLC39A11Q8N1S5 342 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 GAL3ST3Q96A11 431 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 COQ10AQ96MF6 247 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 LMF1Q96S06 567 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 SLC5A7Q9GZV3 580 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 R3HDMLQ9H3Y0 253 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 SYNPO2LQ9H987 977 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 TEX10Q9NXF1 929 aaPredicted RBP12.96□□□□□ -0.33
RTN4-202ENST00000337526 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 EEF1E1-BLOC1S5C9J1V9 151 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 TP53I11O14683 189 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 FARS2O95363 451 aaKnown RBP12.96□□□□□ -0.33
RTN4-202ENST00000337526 HOXD12P35452 270 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 SOX9P48436 509 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 MLLT11Q13015 90 aaPredicted RBP12.96□□□□□ -0.33
RTN4-202ENST00000337526 LRIF1Q5T3J3 769 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 SNIP1Q8TAD8 396 aaKnown RBP12.96□□□□□ -0.33
RTN4-202ENST00000337526 TCEAL4Q96EI5 215 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 SLC25A44Q96H78 314 aaPredicted RBP12.96□□□□□ -0.33
RTN4-202ENST00000337526 MS4A4AQ96JQ5 239 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 IER3IP1Q9Y5U9 82 aa12.96□□□□□ -0.33
RTN4-202ENST00000337526 BORCS7-ASMTA0A0B4J1R7 106 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 A6NIN4 97 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 FUT1P19526 365 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 PCSK6P29122 969 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 RORAP35398 523 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 HHEXQ03014 270 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 USP53Q70EK8 1073 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 GALNT6Q8NCL4 622 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 CHPT1Q8WUD6 406 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 CNOT9Q92600 299 aaKnown RBP12.96□□□□□ -0.34
RTN4-202ENST00000337526 CASD1Q96PB1 797 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 TREX2Q9BQ50 279 aaPredicted RBP12.96□□□□□ -0.34
RTN4-202ENST00000337526 GPR34Q9UPC5 381 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 ERVK-19Q9WJR5 959 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 HMX3A6NHT5 357 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 PHYHO14832 338 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 IL1AP01583 271 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 PDSS1Q5T2R2 415 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 SLC18B1Q6NT16 456 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 FAM198BQ6UWH4 519 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 METTL4Q8N3J2 472 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 SERINC2Q96SA4 455 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 SLA2Q9H6Q3 261 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 GMEB2Q9UKD1 530 aa12.96□□□□□ -0.34
RTN4-202ENST00000337526 AP1G1O43747 822 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 ADAMTS4O75173 837 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 AMY2BP19961 511 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 NKX3-2P78367 333 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 HSD11B2P80365 405 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 NSDHLQ15738 373 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 RAB30Q15771 203 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 ZNF761Q86XN6 746 aaPredicted RBP12.95□□□□□ -0.34
RTN4-202ENST00000337526 BPIFA2Q96DR5 249 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 ELMOD3Q96FG2 381 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 PARPBPQ9NWS1 579 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 CACNG2Q9Y698 323 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 STRCP1A6NGW2 1772 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 PLCH1Q4KWH8 1693 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 A0A0G2JMP0 313 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 ZNF705EA8MWA4 302 aaPredicted RBP12.95□□□□□ -0.34
RTN4-202ENST00000337526 H0YIV9 168 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 H7C417 338 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 CD3GP09693 182 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 HIST1H1TP22492 207 aaPredicted RBP12.95□□□□□ -0.34
RTN4-202ENST00000337526 ALDH3B2P48448 385 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 PRLHRP49683 370 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 HNRNPFP52597 415 aaKnown RBP12.95□□□□□ -0.34
RTN4-202ENST00000337526 TAP2Q03519 686 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 PIP5KL1Q5T9C9 394 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 OR2G6Q5TZ20 316 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 ARSKQ6UWY0 536 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 TRIM46Q7Z4K8 759 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 HORMAD2Q8N7B1 307 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 OR4M2Q8NGB6 313 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 OR13C3Q8NGS6 347 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 LKAAEAR1Q8TD35 194 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 FAM46BQ96A09 425 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 TRMT2BQ96GJ1 504 aaKnown RBP12.95□□□□□ -0.34
RTN4-202ENST00000337526 PGAM5Q96HS1 289 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 OR52D1Q9H346 318 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 BABAM2Q9NXR7 383 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 HCSTQ9UBK5 93 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 DKKL1Q9UK85 242 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.95□□□□□ -0.34
RTN4-202ENST00000337526 MEGF11A6BM72 1044 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 ARPC5O15511 151 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 OR7A10O76100 309 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 CYP17A1P05093 508 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 AKR1C4P17516 323 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 UQCRC1P31930 480 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 PRPS1P60891 318 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 PLGLB1Q02325 96 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 GRM7Q14831 915 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 GGTA1PQ4G0N0 100 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 METTL11BQ5VVY1 283 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 SLC39A5Q6ZMH5 540 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 NRARPQ7Z6K4 114 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 TEX37Q96LM6 180 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms