RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TGFBR3LH3BV60 316 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 IMPA2O14732 288 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 OR10H2O60403 315 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 ZNF12P17014 697 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 CSTF2P33240 577 aaKnown RBP eCLIP8.24□□□□□ -1.09
SNCA-201ENST00000336904 S100A5P33763 92 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 SLC15A1P46059 708 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 HCCSP53701 268 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 TRA2BP62995 288 aaKnown RBP8.24□□□□□ -1.09
SNCA-201ENST00000336904 MLC1Q15049 377 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 DCST2Q5T1A1 773 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 OTPQ5XKR4 325 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 SLC27A4Q6P1M0 643 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 PLBD1Q6P4A8 553 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 ZNF367Q7RTV3 350 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 CPOQ8IVL8 374 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 TMEM151BQ8IW70 566 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 CADM2Q8N3J6 435 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 ANKK1Q8NFD2 765 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 OR52R1Q8NGF1 315 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 RASSF5Q8WWW0 418 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 FCGR1BQ92637 280 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 DHRS1Q96LJ7 313 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 MS4A4EQ96PG1 132 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 MAP3K3Q99759 626 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 OR51V1Q9H2C8 321 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 TIGARQ9NQ88 270 aa8.24□□□□□ -1.09
SNCA-201ENST00000336904 CD8B2A6NJW9 211 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 C4orf47A7E2U8 309 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 A8MV72 311 aaPredicted RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 RFPL3O75679 317 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 UBXN7O94888 489 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 SAGP10523 405 aaPredicted RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 CD8BP10966 210 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 MAKP20794 623 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 GCGRP47871 477 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 OMPP47874 163 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 EMDP50402 254 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 GFERP55789 205 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 KIAA1024LP59773 190 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 HNRNPA0Q13151 305 aaKnown RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 FZD2Q14332 565 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 OXA1LQ15070 435 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 DEFB133Q30KQ1 61 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 PDZK1Q5T2W1 519 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 C1orf94Q6P1W5 598 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 LYSMD2Q8IV50 215 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 PHC2Q8IXK0 858 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 CELF2-AS1Q8N7Q2 184 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 SRFBP1Q8NEF9 429 aaKnown RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 CNOT9Q92600 299 aaKnown RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 VMP1Q96GC9 406 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 SCARF2Q96GP6 870 aaPredicted RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 CEP19Q96LK0 163 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 CDCA4Q9BXL8 241 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 ISG20L2Q9H9L3 353 aaKnown RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 FBXO8Q9NRD0 319 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 LSM2Q9Y333 95 aaKnown RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 SLC22A7Q9Y694 548 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 CCDC85CA6NKD9 419 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 OXSR1O95747 527 aaPredicted RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 TSPAN19P0C672 248 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 IFI30P13284 250 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 TLX1P31314 330 aaPredicted RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 SMSP52788 366 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 CDH11P55287 796 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 RPS7P62081 194 aaKnown RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 CSNK2BP67870 215 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 PLAURQ03405 335 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 DUSP8Q13202 625 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 GAS6Q14393 721 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 TRAM2Q15035 370 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 CRTC2Q53ET0 693 aaPredicted RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 TMEM64Q6YI46 380 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 TMEM184AQ6ZMB5 413 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 THSD4Q6ZMP0 1018 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 PEX5LQ8IYB4 626 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 SMRP1Q8NCR6 262 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 PIGXQ8TBF5 258 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 SPACA7Q96KW9 195 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 SPATA5L1Q9BVQ7 753 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 PITHD1Q9GZP4 211 aaPredicted RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 LMAN2LQ9H0V9 348 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 BCL2L10Q9HD36 194 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 POU2F3Q9UKI9 436 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 RPL36Q9Y3U8 105 aaKnown RBP8.23□□□□□ -1.09
SNCA-201ENST00000336904 HEATR5AQ86XA9 2040 aa8.23□□□□□ -1.09
SNCA-201ENST00000336904 A0A1W2PPK0 400 aa8.22□□□□□ -1.09
SNCA-201ENST00000336904 H3BSH0 61 aa8.22□□□□□ -1.09
SNCA-201ENST00000336904 TFECO14948 347 aaPredicted RBP8.22□□□□□ -1.09
SNCA-201ENST00000336904 TNFP01375 233 aa8.22□□□□□ -1.09
SNCA-201ENST00000336904 CELP19835 753 aa8.22□□□□□ -1.09
SNCA-201ENST00000336904 TGM1P22735 817 aa8.22□□□□□ -1.09
SNCA-201ENST00000336904 NOS3P29474 1203 aa8.22□□□□□ -1.09
SNCA-201ENST00000336904 SDC2P34741 201 aa8.22□□□□□ -1.09
SNCA-201ENST00000336904 CRYBB2P43320 205 aa8.22□□□□□ -1.09
SNCA-201ENST00000336904 MTNR1AP48039 350 aa8.22□□□□□ -1.09
SNCA-201ENST00000336904 EIF2B2P49770 351 aaKnown RBP8.22□□□□□ -1.09
SNCA-201ENST00000336904 ZNF136P52737 540 aa8.22□□□□□ -1.09
SNCA-201ENST00000336904 ST3GAL3Q11203 375 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms