RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 TBC1D17Q9HA65 648 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 C20orf141Q9NUB4 165 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 SLCO1B1Q9Y6L6 691 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 A6NCN8 305 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 SGK494L7N484 410 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 SNPHO15079 494 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 CT62P0C5K7 136 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 LIMS3P0CW19 117 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 LIMS4P0CW20 117 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 NDUFS1P28331 727 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 TLX1P31314 330 aaPredicted RBP17.64■□□□□ 0.41
RFTN1-201ENST00000334133 SSTR4P31391 388 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 DAB2P98082 770 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 ZAR1Q86SH2 424 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 TRIM69Q86WT6 500 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 SLC22A18Q96BI1 424 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 SERINC2Q96SA4 455 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 TMED9Q9BVK6 235 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 CALML5Q9NZT1 146 aa17.64■□□□□ 0.41
RFTN1-201ENST00000334133 RBMX2Q9Y388 322 aaKnown RBP17.64■□□□□ 0.41
RFTN1-201ENST00000334133 ASNA1O43681 348 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 CDC123O75794 336 aaPredicted RBP17.63■□□□□ 0.41
RFTN1-201ENST00000334133 MSL3P1P0C860 447 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 PRKAR1BP31321 381 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 IFNA8P32881 189 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 IFNGR2P38484 337 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 HEPHL1Q6MZM0 1159 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 RASSF6Q6ZTQ3 369 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 UBE2J2Q8N2K1 259 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 OR2L13Q8N349 312 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 RERGQ96A58 199 aaPredicted RBP17.63■□□□□ 0.41
RFTN1-201ENST00000334133 TM4SF19Q96DZ7 209 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 HDHD5Q9BXW7 423 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 MTHFD2LQ9H903 347 aaPredicted RBP17.63■□□□□ 0.41
RFTN1-201ENST00000334133 ABCB9Q9NP78 766 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 ZNF232Q9UNY5 417 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 GXYLT2A0PJZ3 443 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 DUXAA6NLW8 204 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 RUNX1T1Q06455 604 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 KIR2DS3Q14952 304 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 BAK1Q16611 211 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 KLHL22Q53GT1 634 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 DGAT2L6Q6ZPD8 337 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 SLC22A18ASQ8N1D0 253 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 LINC00471Q8N535 108 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 NT5CQ8TCD5 201 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 ZFYVE21Q9BQ24 234 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 PHF11Q9UIL8 331 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 SLC22A7Q9Y694 548 aa17.63■□□□□ 0.41
RFTN1-201ENST00000334133 ISPDA4D126 451 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 DVL2O14641 736 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 HTR2AP28223 471 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 GCGRP47871 477 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 CSTF1Q05048 431 aaKnown RBP17.62■□□□□ 0.41
RFTN1-201ENST00000334133 LARS2Q15031 903 aaKnown RBP17.62■□□□□ 0.41
RFTN1-201ENST00000334133 MRPL2Q5T653 305 aaKnown RBP17.62■□□□□ 0.41
RFTN1-201ENST00000334133 TMPRSS11AQ6ZMR5 421 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 CPOQ8IVL8 374 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 SMAP2Q8WU79 429 aaPredicted RBP17.62■□□□□ 0.41
RFTN1-201ENST00000334133 NEDD4LQ96PU5 975 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 CRNNQ9UBG3 495 aaPredicted RBP17.62■□□□□ 0.41
RFTN1-201ENST00000334133 NCR1O76036 304 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 ZNF136P52737 540 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 FABP5Q01469 135 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 ILF3Q12906 894 aaKnown RBP eCLIP17.62■□□□□ 0.41
RFTN1-201ENST00000334133 SELENBP1Q13228 472 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 COX18Q8N8Q8 333 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 GRHL3Q8TE85 626 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 LMAN2LQ9H0V9 348 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 SP140LQ9H930 580 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 CPNE7Q9UBL6 633 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 MSRAQ9UJ68 235 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 CACNA1IQ9P0X4 2223 aa17.62■□□□□ 0.41
RFTN1-201ENST00000334133 SLC35F4A4IF30 521 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 SURF4O15260 269 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 SMIM10L1P0DMW3 83 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 DCST2Q5T1A1 773 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 OR51G2Q8NGK0 314 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 SMIM10Q96HG1 83 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 MCOLN1Q9GZU1 580 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 CACYBPQ9HB71 228 aaKnown RBP17.61■□□□□ 0.41
RFTN1-201ENST00000334133 HINT3Q9NQE9 182 aaKnown RBP17.61■□□□□ 0.41
RFTN1-201ENST00000334133 MALT1Q9UDY8 824 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 PILRAQ9UKJ1 303 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 CPEP16870 476 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 CELP19835 753 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 ENDOUP21128 410 aaKnown RBP17.61■□□□□ 0.41
RFTN1-201ENST00000334133 GABRA3P34903 492 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 TMED10P49755 219 aaKnown RBP17.61■□□□□ 0.41
RFTN1-201ENST00000334133 RAB40BQ12829 278 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 HTR4Q13639 388 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 MINDY4Q4G0A6 757 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 PRAMEF8Q5VWM4 474 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 PRAMEF7Q5VXH5 474 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 PLBD1Q6P4A8 553 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 ZNF620Q6ZNG0 422 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 SLC37A2Q8TED4 501 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 FAM60AQ9NP50 221 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 V9GYH0 126 aa17.61■□□□□ 0.41
RFTN1-201ENST00000334133 A0A1W2PQL4 384 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms