RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 LOC100130705A0A1B0GUX0 176 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 A8MVJ9 347 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 RPS7P62081 194 aaKnown RBP14.79□□□□□ -0.04
PDGFB-201ENST00000331163 GPLD1P80108 840 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 CFHR1Q03591 330 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 DGAT2L6Q6ZPD8 337 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.79□□□□□ -0.04
PDGFB-201ENST00000331163 UBE2FQ969M7 185 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 Q9N2J8 555 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 PAK1IP1Q9NWT1 392 aaPredicted RBP14.79□□□□□ -0.04
PDGFB-201ENST00000331163 SLC22A7Q9Y694 548 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 BCKDKO14874 412 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 PRICKLE3O43900 615 aaPredicted RBP14.79□□□□□ -0.04
PDGFB-201ENST00000331163 PRKAR1AP10644 381 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 HOXD11P31277 338 aaPredicted RBP14.79□□□□□ -0.04
PDGFB-201ENST00000331163 ACY1Q03154 408 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 ZNF630Q2M218 657 aaPredicted RBP14.79□□□□□ -0.04
PDGFB-201ENST00000331163 PTOV1Q86YD1 416 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 ABCD2Q9UBJ2 740 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 GMPPBQ9Y5P6 360 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 FAM220BPB1ANY3 271 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 UGT2B11O75310 529 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 LCKP06239 509 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 SPNP16150 400 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 POU6F2P78424 691 aaPredicted RBP14.79□□□□□ -0.04
PDGFB-201ENST00000331163 CTF1Q16619 201 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 COQ5Q5HYK3 327 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 TMEM164Q5U3C3 297 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 ZNF321PQ8N8H1 164 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 CEP76Q8TAP6 659 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 PRRG3Q9BZD7 231 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 TMEM185BQ9H7F4 350 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 DCAF13Q9NV06 445 aaKnown RBP14.79□□□□□ -0.04
PDGFB-201ENST00000331163 B3GNT3Q9Y2A9 372 aa14.79□□□□□ -0.04
PDGFB-201ENST00000331163 TCRBV5S2A0A599 114 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 C19orf67A6NJJ6 358 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 NPPAP01160 153 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 CD40LGP29965 261 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 MAP4K2Q12851 820 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 AGAP7PQ5VUJ5 663 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 TMEM71Q6P5X7 295 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 FAR1Q8WVX9 515 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 DOHHQ9BU89 302 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 CHST8Q9H2A9 424 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 HMGN4O00479 90 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 HCRTR2O43614 444 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 MT-ND2P03891 347 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 ERGP11308 486 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 CD36P16671 472 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 TCN2P20062 427 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 TGM1P22735 817 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 TUBA3CQ13748 450 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 EXOC3L2Q2M3D2 409 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 RBM48Q5RL73 367 aaKnown RBP14.78□□□□□ -0.04
PDGFB-201ENST00000331163 OR8H2Q8N162 312 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 CACTIN-AS1Q8N1I8 211 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 PIK3C3Q8NEB9 887 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 FAM174AQ8TBP5 190 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 TP53INP1Q96A56 240 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 WDR34Q96EX3 536 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 NECTIN3Q9NQS3 549 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 C14orf119Q9NWQ9 140 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 DNAJB9Q9UBS3 223 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 LILRA5A6NI73 299 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 IDSB3KWA1 339 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 SOWAHCQ53LP3 525 aaPredicted RBP14.78□□□□□ -0.04
PDGFB-201ENST00000331163 DCST1Q5T197 706 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 SLC35F1Q5T1Q4 408 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 PDZK1Q5T2W1 519 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 WDR5BQ86VZ2 330 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 ZNF687Q8N1G0 1237 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 CHCHD4Q8N4Q1 142 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 AQP11Q8NBQ7 271 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 C1orf216Q8TAB5 229 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 FEVQ99581 238 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 MCHR1Q99705 422 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 SPATA5L1Q9BVQ7 753 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 BEX2Q9BXY8 128 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 YTHDF1Q9BYJ9 559 aaKnown RBP14.78□□□□□ -0.04
PDGFB-201ENST00000331163 TBL1XR1Q9BZK7 514 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 AKIP1Q9NQ31 210 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 TMEM9BQ9NQ34 198 aa14.78□□□□□ -0.04
PDGFB-201ENST00000331163 PMS2P1A4D2B8 440 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 ANKRD34BA5PLL1 514 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 H0YAE9 185 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 CCRL2O00421 344 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 RGS5O15539 181 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 PDE9AO76083 593 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 GPX2P18283 190 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 USP51Q70EK9 711 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 RAB11FIP2Q7L804 512 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 SAMD14Q8IZD0 417 aaPredicted RBP14.77□□□□□ -0.04
PDGFB-201ENST00000331163 UBE2J2Q8N2K1 259 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 CELF2-AS1Q8N7Q2 184 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 OR10G2Q8NGC3 310 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 HDAC2Q92769 488 aaKnown RBP14.77□□□□□ -0.04
PDGFB-201ENST00000331163 FKBP10Q96AY3 582 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 SLC25A36Q96CQ1 311 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 MTERF3Q96E29 417 aa14.77□□□□□ -0.04
PDGFB-201ENST00000331163 ACTRT3Q9BYD9 372 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms