RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 HGDQ93099 445 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 ADIPOR1Q96A54 375 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 RGMAQ96B86 450 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 CCDC126Q96EE4 140 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 DTNBP1Q96EV8 351 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 BTBD9Q96Q07 612 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 F2RL3Q96RI0 385 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 MS4A8Q9BY19 250 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 NOL11Q9H8H0 719 aaKnown RBP13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 DKKL1Q9UK85 242 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 FBXL2Q9UKC9 423 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 STK38LQ9Y2H1 464 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 MRPS18CQ9Y3D5 142 aaKnown RBP13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 TSC22D4Q9Y3Q8 395 aa13.13□□□□□ -0.31
CTHRC1-201ENST00000330295 SMIM23A6NLE4 172 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 NDUFS8O00217 210 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 ZIC3O60481 467 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 PPM1BO75688 479 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 TGFB1P01137 390 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 CPN2P22792 545 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 ATP5F1P24539 256 aaPredicted RBP13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 TLX1P31314 330 aaPredicted RBP13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 SSTR4P31391 388 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 RBMXP38159 391 aaKnown RBP13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 SSR2P43308 183 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 PDLIM4P50479 330 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 ARFIP1P53367 373 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 CTBP2P56545 445 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 DEPDC1Q5TB30 811 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 WDR93Q6P2C0 686 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 FIGNL1Q6PIW4 674 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 RINLQ6ZS11 566 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 VN1R5Q7Z5H4 357 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 L3MBTL4Q8NA19 623 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 HUS1BQ8NHY5 278 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 HSD17B8Q92506 261 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 PELOQ9BRX2 385 aaKnown RBP13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 HDHD5Q9BXW7 423 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 MS4A12Q9NXJ0 267 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 AHSPQ9NZD4 102 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 PCTPQ9UKL6 214 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 GRID1Q9ULK0 1009 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 CLEC4AQ9UMR7 237 aa13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 WBP11Q9Y2W2 641 aaKnown RBP13.12□□□□□ -0.31
CTHRC1-201ENST00000330295 TLDC2A0PJX2 215 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 CCDC151A5D8V7 595 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 PRAMEF25A6NGN4 478 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 GOLGA8RI6L899 631 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 FOXE1O00358 373 aaPredicted RBP13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 SEC14L5O43304 696 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 GLRA3O75311 464 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 PLGP00747 810 aaPredicted RBP13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 ZNF23P17027 643 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 NAGAP17050 411 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 HSD17B3P37058 310 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 LIMS1P48059 325 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 HILS1P60008 231 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 NAA20P61599 178 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 VSNL1P62760 191 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 TSC22D1Q15714 1073 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 IQCCQ4KMZ1 466 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 OR4C11Q6IEV9 310 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 NUP54Q7Z3B4 507 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 MUC15Q8N387 334 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 RIBC1Q8N443 379 aaPredicted RBP13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 ACOT4Q8N9L9 421 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 MRPL24Q96A35 216 aaKnown RBP13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 GMPPAQ96IJ6 420 aaPredicted RBP13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 MTERF1Q99551 399 aaKnown RBP13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 SERPINI1Q99574 410 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 IQCGQ9H095 443 aaKnown RBP13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 STMN4Q9H169 189 aaPredicted RBP13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 ELOVL6Q9H5J4 265 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 RPF2Q9H7B2 306 aaKnown RBP13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 NMRK1Q9NWW6 199 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 TMEM216Q9P0N5 145 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 MID2Q9UJV3 735 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 PCDHB10Q9UN67 800 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 SNX6Q9UNH7 406 aa13.11□□□□□ -0.31
CTHRC1-201ENST00000330295 A8MT66 165 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 COPEO14579 308 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 SMAD9O15198 467 aaKnown RBP13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 SS18L1O75177 396 aaPredicted RBP13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 SUPT7LO94864 414 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 AIFM1O95831 613 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 SHBGP04278 402 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 MYL2P10916 166 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 HIST1H1TP22492 207 aaPredicted RBP13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 IL32P24001 234 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 ATP5A1P25705 553 aaKnown RBP13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 CUL3Q13618 768 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 CCDC153Q494R4 210 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 FRG2Q64ET8 278 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 ADNP2Q6IQ32 1131 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 CCDC63Q8NA47 563 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 C17orf47Q8NEP4 570 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 GFM2Q969S9 779 aaKnown RBP13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 FRG2BQ96QU4 278 aa13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 ROPN1BQ9BZX4 212 aaPredicted RBP13.1□□□□□ -0.31
CTHRC1-201ENST00000330295 OR51B5Q9H339 312 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms