RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 THY1P04216 161 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 PRKAR1AP10644 381 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 PSKH1P11801 424 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 TSFMP43897 325 aaKnown RBP14.35□□□□□ -0.11
BRCC3-201ENST00000330045 LRRC32Q14392 662 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 C6orf132Q5T0Z8 1188 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 ZNF620Q6ZNG0 422 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 MBOAT2Q6ZWT7 520 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 GDF7Q7Z4P5 450 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 ZNF438Q7Z4V0 828 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 TMEM255BQ8WV15 326 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 DNAJA4Q8WW22 397 aaPredicted RBP14.35□□□□□ -0.11
BRCC3-201ENST00000330045 SLC35A4Q96G79 324 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 ZC3HAV1LQ96H79 300 aaKnown RBP14.35□□□□□ -0.11
BRCC3-201ENST00000330045 MYADMQ96S97 322 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 TIMM29Q9BSF4 260 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 SYNPO2LQ9H987 977 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 SPHK1Q9NYA1 384 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 C2orf92A0A1B0GVN3 265 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 CD8B2A6NJW9 211 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 KLF4O43474 513 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 PIP5K1CO60331 668 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 POU2F2P09086 479 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 CD8BP10966 210 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 PTBP1P26599 531 aaKnown RBP eCLIP14.34□□□□□ -0.11
BRCC3-201ENST00000330045 COL9A2Q14055 689 aaPredicted RBP14.34□□□□□ -0.11
BRCC3-201ENST00000330045 TATDN3Q17R31 274 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 THOC7Q6I9Y2 204 aaKnown RBP14.34□□□□□ -0.11
BRCC3-201ENST00000330045 DUSP18Q8NEJ0 188 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 OR2T33Q8NG76 320 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 SENP5Q96HI0 755 aaPredicted RBP14.34□□□□□ -0.11
BRCC3-201ENST00000330045 SARGQ9BW04 601 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 SLA2Q9H6Q3 261 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 B3GAT2Q9NPZ5 323 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 ASB6Q9NWX5 421 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 NLGN3Q9NZ94 848 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 TNFRSF10DQ9UBN6 386 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 DOCK9Q9BZ29 2069 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.34□□□□□ -0.11
BRCC3-201ENST00000330045 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.34□□□□□ -0.11
BRCC3-201ENST00000330045 GSAPA4D1B5 854 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 OR5F1O95221 314 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 ASGR2P07307 311 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 PEBP1P30086 187 aaKnown RBP14.34□□□□□ -0.11
BRCC3-201ENST00000330045 FGL2Q14314 439 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 AGERQ15109 404 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 PDGFRLQ15198 375 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 ZNF322Q6U7Q0 402 aaPredicted RBP14.34□□□□□ -0.11
BRCC3-201ENST00000330045 ABI3BPQ7Z7G0 1075 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 GLCCI1Q86VQ1 547 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 KLBQ86Z14 1044 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 SLC16A11Q8NCK7 471 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 FGF14Q92915 247 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 NDEL1Q9GZM8 345 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 C6orf106Q9H6K1 298 aaPredicted RBP14.34□□□□□ -0.11
BRCC3-201ENST00000330045 MOSPD1Q9UJG1 213 aa14.34□□□□□ -0.11
BRCC3-201ENST00000330045 DUXAA6NLW8 204 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 SOCS6O14544 535 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 LYRM1O43325 122 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 HMGN1P05114 100 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 NDUFV2P19404 249 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 CFL1P23528 166 aaKnown RBP14.33□□□□□ -0.12
BRCC3-201ENST00000330045 WASP42768 502 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 SOX9P48436 509 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 STXBP1P61764 594 aaKnown RBP14.33□□□□□ -0.12
BRCC3-201ENST00000330045 BTN3A2P78410 334 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 RIN1Q13671 783 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 CST6Q15828 149 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 FAM214AQ32MH5 1076 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 EOGTQ5NDL2 527 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 VASNQ6EMK4 673 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 HEPHL1Q6MZM0 1159 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 PAMR1Q6UXH9 720 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 FRRS1Q6ZNA5 592 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 NRROSQ86YC3 692 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 CPOQ8IVL8 374 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 MFSD9Q8NBP5 474 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 NLGN4YQ8NFZ3 816 aaPredicted RBP14.33□□□□□ -0.12
BRCC3-201ENST00000330045 OTULINQ96BN8 352 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 SAMD8Q96LT4 415 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 TMEM43Q9BTV4 400 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 HINT3Q9NQE9 182 aaKnown RBP14.33□□□□□ -0.12
BRCC3-201ENST00000330045 SERGEFQ9UGK8 458 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 MSRAQ9UJ68 235 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 ZNF443Q9Y2A4 671 aaPredicted RBP14.33□□□□□ -0.12
BRCC3-201ENST00000330045 CDH10Q9Y6N8 788 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 SNRNP200O75643 2136 aaKnown RBP14.33□□□□□ -0.12
BRCC3-201ENST00000330045 FAM240BA0A1B0GVZ2 78 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 CCDC85CA6NKD9 419 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 CDC42EP2O14613 210 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 ALAS2P22557 587 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 CMPK1P30085 196 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 PUS10Q3MIT2 529 aaKnown RBP14.33□□□□□ -0.12
BRCC3-201ENST00000330045 FAM111BQ6SJ93 734 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 PARM1Q6UWI2 310 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 TMEM91Q6ZNR0 172 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 PEX5LQ8IYB4 626 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 HDDC3Q8N4P3 179 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 RNF32Q9H0A6 362 aa14.33□□□□□ -0.12
BRCC3-201ENST00000330045 SYNDIG1Q9H7V2 258 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms