RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 WDR26Q9H7D7 661 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 TDP1Q9NUW8 608 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 CNIH4Q9P003 139 aa11.97□□□□□ -0.49
CCDC60-201ENST00000327554 MRPS7Q9Y2R9 242 aaKnown RBP11.97□□□□□ -0.49
CCDC60-201ENST00000327554 GALR3O60755 368 aaPredicted RBP11.96□□□□□ -0.49
CCDC60-201ENST00000327554 NTN1O95631 604 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 PLATP00750 562 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 VEGFCP49767 419 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 MLLT1Q03111 559 aaPredicted RBP11.96□□□□□ -0.49
CCDC60-201ENST00000327554 TSPAN31Q12999 210 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 TMEM255AQ5JRV8 349 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 B3GNTL1Q67FW5 361 aaPredicted RBP11.96□□□□□ -0.49
CCDC60-201ENST00000327554 HIST2H2AA3Q6FI13 130 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 MTFR2Q6P444 385 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 HMGN2P46Q86SG4 172 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 TPRA1Q86W33 373 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 HS6ST3Q8IZP7 471 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 FAM71CQ8NEG0 241 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 OR4D9Q8NGE8 314 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 OR1S1Q8NH92 325 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 GNPDA2Q8TDQ7 276 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 OR5P2Q8WZ92 322 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 MRPS24Q96EL2 167 aaKnown RBP11.96□□□□□ -0.49
CCDC60-201ENST00000327554 TMPRSS13Q9BYE2 586 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 AUNIPQ9H7T9 357 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 SIRT3Q9NTG7 399 aaPredicted RBP11.96□□□□□ -0.49
CCDC60-201ENST00000327554 BABAM2Q9NXR7 383 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 RNF181Q9P0P0 153 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 MGAT4CQ9UBM8 478 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 CD84Q9UIB8 345 aa11.96□□□□□ -0.49
CCDC60-201ENST00000327554 A0A1B0GUH1 482 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 OR2M5A3KFT3 312 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 FAM74A7A6NL05 159 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 SOCS6O14544 535 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 GSTZ1O43708 216 aaPredicted RBP11.96□□□□□ -0.5
CCDC60-201ENST00000327554 SUSD5O60279 629 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 PRAF2O60831 178 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 GNSP15586 552 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 THPOP40225 353 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 PITPNAQ00169 270 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 FAM74A3Q4VXF1 159 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 SFRP4Q6FHJ7 346 aaPredicted RBP11.96□□□□□ -0.5
CCDC60-201ENST00000327554 ESPNLQ6ZVH7 1005 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 PRSS45Q7RTY3 260 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 LURAP1LQ8IV03 231 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 SPICQ8N5J4 248 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 LILRA3Q8N6C8 439 aaPredicted RBP11.96□□□□□ -0.5
CCDC60-201ENST00000327554 KCT2Q8NC54 265 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 FAM98AQ8NCA5 519 aaKnown RBP11.96□□□□□ -0.5
CCDC60-201ENST00000327554 WDR34Q96EX3 536 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 AHCYL2Q96HN2 611 aaKnown RBP11.96□□□□□ -0.5
CCDC60-201ENST00000327554 TTYH1Q9H313 450 aaPredicted RBP11.96□□□□□ -0.5
CCDC60-201ENST00000327554 HMX1Q9NP08 348 aaPredicted RBP11.96□□□□□ -0.5
CCDC60-201ENST00000327554 NANSQ9NR45 359 aa11.96□□□□□ -0.5
CCDC60-201ENST00000327554 HNRNPCL2B2RXH8 293 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 ZNF197O14709 1029 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 SLC2A10O95528 541 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 CBX7O95931 251 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 GIPP09681 153 aaPredicted RBP11.95□□□□□ -0.5
CCDC60-201ENST00000327554 SERPINA4P29622 427 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 ATP6V1E1P36543 226 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 PREPP48147 710 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 MEF2AQ02078 507 aaPredicted RBP11.95□□□□□ -0.5
CCDC60-201ENST00000327554 CRHR2Q13324 411 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 IRF5Q13568 498 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 HTR4Q13639 388 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 TMEM44Q2T9K0 475 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 METTL11BQ5VVY1 283 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 OR5M10Q6IEU7 315 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 FAM83HQ6ZRV2 1179 aaPredicted RBP11.95□□□□□ -0.5
CCDC60-201ENST00000327554 SLC9B2Q86UD5 537 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 LMNTD1Q8N9Z9 388 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 RGMAQ96B86 450 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 FCRL4Q96PJ5 515 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 SEC22CQ9BRL7 303 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 GSDMCQ9BYG8 508 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 GPR62Q9BZJ7 368 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 ABCG4Q9H172 646 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 ZNF304Q9HCX3 659 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 BACE2Q9Y5Z0 518 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 A0A0B4J203 849 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 OR2AG2A6NM03 316 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 LINC01387J3KSC0 135 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 APOC3P02656 99 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 CATP04040 527 aaKnown RBP11.95□□□□□ -0.5
CCDC60-201ENST00000327554 NPPBP16860 134 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 MAOBP27338 520 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 S100A11P31949 105 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 GDNFP39905 211 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 MAPK8P45983 427 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 SPINT3P49223 89 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 CCR8P51685 355 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 MANFP55145 182 aaKnown RBP11.95□□□□□ -0.5
CCDC60-201ENST00000327554 CNTN1Q12860 1018 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 GLB1LQ6UWU2 654 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 CEACAM19Q7Z692 300 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 OR51G2Q8NGK0 314 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 FAM46AQ96IP4 442 aaKnown RBP11.95□□□□□ -0.5
CCDC60-201ENST00000327554 OR51I1Q9H343 314 aa11.95□□□□□ -0.5
CCDC60-201ENST00000327554 EVA1AQ9H8M9 152 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms